Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0772 ATGGATAAAGCATCCAACTTTGATGAAAATTCTGAGGTGGGTTATCACCCTTCACCTTCCAATACTACTGCTTTTTCCCCAATGAGTCGAGATTCCTTTGCATATTGCCAAACTTGGACAAGCTCAGAGTCTGAGATTGTAGATGACAGTAGCTATGCCAGTGAACCTTCACCTTCTCGGTGGAGGGCCAAGCAAGATGTTCTTTCAAAGCTAGGAATGAAGCTGCGCAGACATTCAATTGATGATAAACTTGGTGACAGTGATCTCTTGGATTCAGCTGAGCTTGAACTGATGAAGGAAAGATTTGCAAAGCTTTTGCTGGGAGAAGACATGTCTGGTAGTGGGAAAGGTGTCTGCACTGCAGCTACAATCTCAAACGCCATTACCAATCTCTATGCAACTGTATTCGGACAAAGTTTGAAGTTGGAACCGCTAAAGCCTGAGAAGAAGGCTATGTGGAAAAGGGAAATGAAGGTTCTCTTATCAGTGTGTGAATACATACAAGAATTTGCTCCAACTGCACAATATTTAGAAGATGGAACAATTGTTGAGATGATGAAAAGCAGGCCAAGGTCAGACATCTACATCAACCTCCCTGCACTGCAGAAGCTTGATACAATGCTCATTGAAATATTAGATACTTTCCACGACACTGAATTTTGGTATGCAGAGAACATACCAGGGAATTCGAATAGATTACGTGGAGCATCAAGTCGAAGAACTGCTCCAAGGAAAGATGAGAAATGGTGGTTGCCAGTTCCTTGTGTTCTTCCTGGTGGCCTCTCTGACATGTCAAAAAAGCATCTGATAGAGAAAAGGGATTGTGCTAATCAAATTCATAAAGCTGCCATGGCAATAAACAGCAATGTTCTTGCAGAAATAGATATCCCGGAAAATTATATAGATAATCTTCCCAAGCTGAAATTCTATTGCCAAGTGATTGAGGATTCAATTAAATGTGACCCCATAAAGCAAATGTCTTGGAATTTTTCATCAAATTTCATAAGCCTTTTATGGAAGCCAATAATAGCAGCTGAGACATGTAGAAAACGGGATGATATAGTTTCAATTAAGAGTGGGAGATCAAGTCTGGGGGACTCAATTTACAATTACATGAACAATGCAGACAAATTCTCACCTGAACAACTTCTTGACTGCCTCAAAATAAGCTCTGAACGTGAAGCACTTGAGTTAGCTGACAGGGTTGAGTCATCAATGTACACGTGGAGACGCAAGGCTTGTCTGAGCCATTCAAAGTCATCATGGAGCAAAGTAAAGGATCTCATTGAAGAGACAGATTCTAAGGACAAAAACTACACCTTAGCTGAGAGAGCTGAGTCCTTATTGCTTTGCCTGAAGCAAAGATATCCTGAACTTTCACAAACTTCTCTGGACACATGCAAGATCCAATACAACCGGGATGTAGGGAAAGCAGTACTAGAGAGCTATTCTAGAGTTTTGGAAAGCTTAGCATTCAACATTGTTGCATGGATTGAAGATGTTCTTTATGTAGATAAATCAATGAGGAATCGAGAGGTTTAG 1542 0.4073 MDKASNFDENSEVGYHPSPSNTTAFSPMSRDSFAYCQTWTSSESEIVDDSSYASEPSPSRWRAKQDVLSKLGMKLRRHSIDDKLGDSDLLDSAELELMKERFAKLLLGEDMSGSGKGVCTAATISNAITNLYATVFGQSLKLEPLKPEKKAMWKREMKVLLSVCEYIQEFAPTAQYLEDGTIVEMMKSRPRSDIYINLPALQKLDTMLIEILDTFHDTEFWYAENIPGNSNRLRGASSRRTAPRKDEKWWLPVPCVLPGGLSDMSKKHLIEKRDCANQIHKAAMAINSNVLAEIDIPENYIDNLPKLKFYCQVIEDSIKCDPIKQMSWNFSSNFISLLWKPIIAAETCRKRDDIVSIKSGRSSLGDSIYNYMNNADKFSPEQLLDCLKISSEREALELADRVESSMYTWRRKACLSHSKSSWSKVKDLIEETDSKDKNYTLAERAESLLLCLKQRYPELSQTSLDTCKIQYNRDVGKAVLESYSRVLESLAFNIVAWIEDVLYVDKSMRNREV* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0772 513 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 1 513 IPR038937 GO:0005085
Vra4g0772 513 Gene3D PRONE domain, subdomain 2 358 471 - -
Vra4g0772 513 Gene3D PRONE domain, subdomain 1 472 506 - -
Vra4g0772 513 Gene3D PRONE domain, subdomain 1 88 327 - -
Vra4g0772 513 PANTHER PRONE DOMAIN-CONTAINING PROTEIN-RELATED 1 513 - -
Vra4g0772 513 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 358 509 IPR005512 GO:0005085
Vra4g0772 513 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 94 307 IPR005512 GO:0005085
Vra4g0772 513 MobiDBLite consensus disorder prediction 1 28 - -
Vra4g0772 513 MobiDBLite consensus disorder prediction 11 28 - -
Vra4g0772 513 ProSiteProfiles PRONE domain profile. 85 513 IPR005512 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0772 Vra-Chr4 14471342 14474721 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0772 - - gmx:100806086 938.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0772 4 14471342 14474721 Vra4g0772 4 14471342 14474721 ECH
Vra4g0772 4 14471342 14474721 Vra9g0575 9 6432992 6436238 PCT