Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0566 ATGGTTTCAGTTGGAGCTGTTCATAGTGTGGTGTACGTGCTCCTGCTTTCAGTCACTTTGGTTTTGGGTGGGGACATAGTTCACCATGATGATGTTGCCCCCATAAGGCCTGGTTGTGACAACAACTTTGTTTTGGTAAAAGTCCCAACTTGGATTGATGGTGTGGAAAAAAGTGAGTATGTTGGTGTTGGTGCAAGATTTGGCCCTACGTTGGAATCAAAAGAAAAACGTGCCAATCTTACCAGAGTTGTCATGGCTGATCCTCCTGATTGTTGTACAAAGCCTAAGAATAAACTCACGAGTGAGATAATTTTGGTGCACCGAGGAAAGTGCAGTTTTACTACAAAGGCGAATATTGCTGATGAAGCTGGTGCTTCAGCCATCCTCATTATAAACTACCGTACAGAACTTTTCAAGATGGTTTGTGAAGAAAATGAAACTGATGTTGATATAGGAATACCTGCTGTCATGCTTCCCCAAGATGCTGGATTGACTTTGGAAAGGCATATTAAAAATAACTCCAATGTGTCCATACAGTTATACTCTCCATTGCGTCCATTGGTTGATGTTGCGGAAGTGTTTTTGTGGCTTATGGCTGTTGGTACCATTTTATGTGCTTCATATTGGTCTGCCTGGAGTGCTAGAGAAGCAGCTATTGAGCAAGAGAAGCTTTTAAAGGATGCTTCGGATGACTATACTAATACAGAAAATGTTGGTTCCAGTGGTTATGTGGAAATTAGTACCATAGCAGCAGTCTTATTCGTCGTGATTGCTTCATGTTTCTTGGTTATGCTGTATAAATTAATGTCATTCTGGTTTGTTGAAGTTCTGGTGGTTCTGTTTTGCATTGGCGGGGTAGAGGGACTGCAAACTTGTTTGGTGGCCCTATTATCATGTTTTAGATGGTTTCGCCAACCTGCCCAGACATTTGTGAAGATACCCTTCTTTGGAGCTGTCTCATATCTGACACTTGCTGTTACTCCATTCTGCATAGTGTTCGCTGTGGTTTGGGCGGTTTGTCGCCGTGCATCATGGGCTTGGATTGGTCAAGATATCCTTGGTATCACATTGATAATTACAGTTCTTCAGATTGTTCGCATACCAAATCTAAAGGTTGGGACTGTTCTTCTCAGTTGTGCATTCCTATATGACATCTTCTGGGTGTTTGTCTCTAAATGGTGGTTCCATGAGAGTGTGATGATAGTGGTAGCTCGTGGTGATAAGAGTGGAGAAGATGGCATTCCCATGCTTCTCAAGATACCTCGTCTATTTGACCCTTGGGGTGGTTACAGTATCATTGGATTTGGGGACATAATCTTACCAGGACTTATAGTGGCATTTTCACTAAGGTATGATTGGTTGGCAAAGAAGAACCTTCGTGCCGGATACTTCTTATGGGCAATGACTGCTTATGGTTTAGGTCTCCTCATCACGTATGTGGCCTTGAACTTGATGGATGGGCATGGTCAGCCAGCTTTACTTTATATAGTTCCATTTACACTTGGCACCTTTTTGTCATTGGGAAAAAAGAGAGGTGAGCTCAAGATTTTATGGACAAGAGGGGAACCAGAAAGGCCTTGCTGTCATATCCAAGAGGATAATCAATCAATTAACAGTCACCATTGA 1626 0.4237 MVSVGAVHSVVYVLLLSVTLVLGGDIVHHDDVAPIRPGCDNNFVLVKVPTWIDGVEKSEYVGVGARFGPTLESKEKRANLTRVVMADPPDCCTKPKNKLTSEIILVHRGKCSFTTKANIADEAGASAILIINYRTELFKMVCEENETDVDIGIPAVMLPQDAGLTLERHIKNNSNVSIQLYSPLRPLVDVAEVFLWLMAVGTILCASYWSAWSAREAAIEQEKLLKDASDDYTNTENVGSSGYVEISTIAAVLFVVIASCFLVMLYKLMSFWFVEVLVVLFCIGGVEGLQTCLVALLSCFRWFRQPAQTFVKIPFFGAVSYLTLAVTPFCIVFAVVWAVCRRASWAWIGQDILGITLIITVLQIVRIPNLKVGTVLLSCAFLYDIFWVFVSKWWFHESVMIVVARGDKSGEDGIPMLLKIPRLFDPWGGYSIIGFGDIILPGLIVAFSLRYDWLAKKNLRAGYFLWAMTAYGLGLLITYVALNLMDGHGQPALLYIVPFTLGTFLSLGKKRGELKILWTRGEPERPCCHIQEDNQSINSHH* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0566 541 PANTHER SIGNAL PEPTIDE PEPTIDASE 6 541 IPR007369 GO:0004190|GO:0016021
Vra9g0566 541 Pfam PA domain 89 166 IPR003137 -
Vra9g0566 541 Pfam Signal peptide peptidase 243 522 IPR007369 GO:0004190|GO:0016021
Vra9g0566 541 Gene3D - 41 183 - -
Vra9g0566 541 PANTHER PA DOMAIN, PRESENILIN/SIGNAL PEPTIDE PEPTIDASE-RELATED 6 541 - -
Vra9g0566 541 SMART psh_8 242 511 IPR006639 GO:0004190|GO:0016021
Vra9g0566 541 SUPERFAMILY PA domain 98 136 IPR046450 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0566 Vra-Chr9 6306444 6315092 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0566 K09597 - gmx:100795197 1027.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0566 9 6306444 6315092 Vra9g0566 9 6306444 6315092 ECH
Vra4g0776 4 14565423 14572894 Vra9g0566 9 6306444 6315092 PCT