Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0776 ATGGCTTCACTTGGAGCTTCCTGTGCTCTCTGTTGTTCTGTGTTCATGATATTTTTCACTTTCAGTTTTGCTGGGGACATAGTGCACCATGATAATATTGCTCCCAAGAGACCTGGCTGTGAGAACAACTTTGTCCTGGTTAAAGTTCCAACTTGGATTGATGGTGTGGAAAGCTGTGAGTATGTTGGCGTTGGTGCAAGGTTTGGCCCTACACTGGAGTCAAAAGAAAAACGTGCTAACCATACTAGAATTGCAATTGCTGATCCTCCTGATTGTTGTAGCCTACCTAAGAATAAGCTCACTGGCGAGATCATTTTGGTGCACCGAGGACAGTGTAGTTTCACAACCAAGGCAAATATAGCTGAACAGGCTGGTGCTTCAGCCATGCTGATTATAAATTACCGTACAGAACTTTTCAAGATGGTTTGCGAAGCAAATGAAACTGATGTGGATATTGGAATACCTACCGTCATGCTTCCACAAGATGCTGGGGAAAACTTGGAAAATCACATACTAAACAACTCAGTGGTGTCTGTGCAGTTATACTCTCCATATCGTCCAATGGTTGATGTTGCAGAAGTGTTTTTATGGCTTATGGCTGTTGGTAGTATTCTCTGTGCTTCTTACTGGTCTGCCTGGACTGCGAGAGAGTCTGCCATTGAACAGGAGAAGCTATTAAAGGATGCTTCAGATGAATATGTAAATGCAGAGAATGCTGGTTCTAGTGCTTATGTGGAAATCAGTACTGCAGCAGCAATATCATTTGTTGTGATTGCTTCTTGTTTCTTGGTTATGCTTTACAAATTCATGGCATCATGGTTTGTTGAAGTTCTGGTGGTTCTATTCTGCATTGGTGGGGTTGAGGGACTACAAACATGCTTGGTGGCTCTGTTATCATGTTTCAGATGGTTCCAGCATGCTGCACAAATATTTGTGAAAGTACCCTTCTTTGGTGCTGTATCATATCTGACAGTTGCTGTTACTCCCTTCTGCATAGTATTTGCTGTGCTTTGGGGTGTTTATCGCCATGTATCATTTGCTTGGATTGGTCAAGATATTCTTGGTATCACATTGATTATTACAGTTCTTCAGATTGTGCGGATACCAAATCTCAAGGTTGGAACTGTTCTTCTCAGTTGTGCCTTTCTGTATGACATCTTCTGGGTGTTTGTCTCTAAATGGTGGTTCCATGAGAGTGTCATGATAGTGGTAGCTCGAGGTGATAAGAGTGGAGAAGATGGTATCCCCATGCTGCTCAAGATACCACGTTTGTTTGATCCTTGGGGTGGTTACAGCATCATTGGTTTTGGGGACATCATCTTACCAGGGCTTCTAGTTGCATTTTCACTAAGGTATGATTGGTTAGCAAAGAAGAACCTTCGAGATGGATACTTCGTGTGGGCAATGACTGCTTATGGTTTAGGACTCCTTATCACATACATGGCTCTGAACTTGATGGATGGACATGGTCAACCTGCTTTGCTTTATATAGTTCCGTTTACACTTGGAACCTTTTTGTCATTAGGAAAGAAGAGAGGTGAACTCAAGGTACTATGGACAAGAGGGGAACCAAAAATACCTTGCCCTCACATCCAAGAGGATCAATCAACAAACCAGTAA 1620 0.4247 MASLGASCALCCSVFMIFFTFSFAGDIVHHDNIAPKRPGCENNFVLVKVPTWIDGVESCEYVGVGARFGPTLESKEKRANHTRIAIADPPDCCSLPKNKLTGEIILVHRGQCSFTTKANIAEQAGASAMLIINYRTELFKMVCEANETDVDIGIPTVMLPQDAGENLENHILNNSVVSVQLYSPYRPMVDVAEVFLWLMAVGSILCASYWSAWTARESAIEQEKLLKDASDEYVNAENAGSSAYVEISTAAAISFVVIASCFLVMLYKFMASWFVEVLVVLFCIGGVEGLQTCLVALLSCFRWFQHAAQIFVKVPFFGAVSYLTVAVTPFCIVFAVLWGVYRHVSFAWIGQDILGITLIITVLQIVRIPNLKVGTVLLSCAFLYDIFWVFVSKWWFHESVMIVVARGDKSGEDGIPMLLKIPRLFDPWGGYSIIGFGDIILPGLLVAFSLRYDWLAKKNLRDGYFVWAMTAYGLGLLITYMALNLMDGHGQPALLYIVPFTLGTFLSLGKKRGELKVLWTRGEPKIPCPHIQEDQSTNQ* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0776 539 PANTHER SIGNAL PEPTIDE PEPTIDASE 11 536 IPR007369 GO:0004190|GO:0016021
Vra4g0776 539 PANTHER PA DOMAIN, PRESENILIN/SIGNAL PEPTIDE PEPTIDASE-RELATED 11 536 - -
Vra4g0776 539 SMART psh_8 243 512 IPR006639 GO:0004190|GO:0016021
Vra4g0776 539 Pfam PA domain 90 167 IPR003137 -
Vra4g0776 539 Coils Coil 219 239 - -
Vra4g0776 539 Pfam Signal peptide peptidase 243 523 IPR007369 GO:0004190|GO:0016021
Vra4g0776 539 SUPERFAMILY PA domain 90 139 IPR046450 -
Vra4g0776 539 Gene3D - 40 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0776 Vra-Chr4 14565423 14572894 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0776 K09597 - gmx:100808921 1046.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0776 4 14565423 14572894 Vra4g0776 4 14565423 14572894 ECH
Vra4g0776 4 14565423 14572894 Vra9g0566 9 6306444 6315092 PCT