Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0549 ATGGCNCAAGAAACTGTGGTGAAGAGGTCACCCTCTCAAGCAAAATTTCACAGGGTTCAATTTGCAATAAGGCTGTTGGNGCTGGTTTTGTTCTTGGGTTGGATTTTCATTTGGATAATGTCACCCACAAATACTTTTANACAAANNTGGCTTCCAAGATACAGNGCAAAGACTGNCAATACAACTTATTTGGGTTCAAAAGGTTCTAATCTTCTGATGTACACATTCTCAATNTTGCTCATAGCTACTTTGGGGTGTGTCTACCTCCACATAATAAAAAAAGCAAATGACTCCAACATGGAAATCAGCAACTCAAAGAAATATGAGATAGCCCTATGGAAGCGTTCAGTGCTTATAAAAGGCCCTCTTGGCATTGTCTCTGGCACAGAGCTTGCATTCTTGCTCATGTTCATTGCACTCCTTGTCTGGNCCTTTGCAACTTCTTTAAGCAACAGCTTTGCAAAAATCACCCCCGAATCAGCAGCACAGGATGGCGAGAAAATATGGGAAGAGAAGCTAGACAGTGCAGGATTGATATCTGGTGTTGTTGGGAACATATGTTTGGTATTCATGTTTTTTCCTGTGGCTCGTGGTTCAAGCGTGCTGCCACTGCTTGGTCTCACTTCTGAAAGTTGCATTAAGTACCATATTTGGCTTGGACATATTGCCATGCCACTATTCACTGCTCACGGTTTGAGCTTCATCATCCATTGGGCAATTATTAATCACTTGTCTGCGATGCTGGAATGGAAGAAAAACGATATATCAATTGTGGCTGGAGAGATAACTTTGCTTGCNGGTTTGTTACTATGGATTGCAACTATTCCCCGCATTAGGCGAACATATTTTGAACTCTTCTATTACGCTCATCACCTCTACATCCTCTTCATAGTCTTCTTCATCTTTCATGTTGGCATTTCCTATGCCTTAATTATGCTCCCTGGTTTCTACCTCTTCATGGTCGATCGTTACTTGAGGTTTCTGCAATCAAGACGCCAAGTTCGTCTGGTTTCTGCTCGGGTNTTGCCATGTGAAGCTGTGGAACTCAACTTCTCCAAGGGCCATGGATTAACTTACAACCCCACAAGTGTGATGTTCATAAATGTACCAAGCATATCCAAGCTGCAGTGGCATCCATTTACTGTTACTTCTAATAATAATTTGGAGGCAGACAAGCTAAGTGTTNTTNTTAAAAGTGAAGGACCTTGGACCAATAAGCTATACCAGTTGCTTTCAACTCCTTCNACAATTGATCGCCTTTCTGTGTCTGTNGAAGGTCCTTATGGACCTGCTTCAACCAACTATCTACGGCATGACACTCTTGTGATGGTGAGTGGAGGAAGTGGCATCACACCTTTTATATCCATCATTCGGGAGCTAATACATCTGAACACTATATTCAAATGCAAAACCCCGAAAGTCGTCCTAATTTGTGCCTTCAAGAACTCTTCTTCTCTGTCAATGCTAGAGTTGATCCTCCCAATAAATGGCANCCCTTCTGATATTTCTAATTTAGAATTACAAATTGAGGCCTACATCACAAGGGACAAGGAGCCTAAAGCAGATGGCCCTATTCACCCTCAAATCAGATGGTTCAAGCCAAATCCATCNGATGAACCAGTACACGCTATATTAGGTCCAAACAGTTGGCTCTGGCTTGGTGCTATAATTTCATCCTCTTTCGTNGTTTTCCTTATCTTAATAGGGATCATTACCCGTTACTACATTTTCCCAATTGATCATAACTCAAATNAAATATTTTCCTACCCTTTGAATGCATTCCTTAACATGCTAGTAATATGTGTGTCCATAGCAAGTGTTTCCACTGCAGCTTTTCTTTGGAACAAGAAATATTATGCTAAAGAAGGAAAGCAGATTCAGAACATGGAAGGGTCTACACCAACGGTGTCGCCAAACTCCATGGTTTACAATGTTGATAGAGAACTGGAAAGTCTTCCATATCAGTCACTTATTCAAGCCACCAATGTGCATTATGGTGTAAGACCTGACCTAAGAAAGATCCTATTTGNGCACAAAGGGTCTAGTGTGGGAGTTCTTGCTTCAGGACCCAAAACAATGAGGCATGAGGTTGCAGCCATTTGCTCCTCATCTGNTTTAGCTGAGAATCTGCATTTTGAGTCTATTAGCTTTAGCTGGTGA 2160 0.412 MAQETVVKRSPSQAKFHRVQFAIRLLXLVLFLGWIFIWIMSPTNTFXQXWLPRYXAKTXNTTYLGSKGSNLLMYTFSXLLIATLGCVYLHIIKKANDSNMEISNSKKYEIALWKRSVLIKGPLGIVSGTELAFLLMFIALLVWXFATSLSNSFAKITPESAAQDGEKIWEEKLDSAGLISGVVGNICLVFMFFPVARGSSVLPLLGLTSESCIKYHIWLGHIAMPLFTAHGLSFIIHWAIINHLSAMLEWKKNDISIVAGEITLLAGLLLWIATIPRIRRTYFELFYYAHHLYILFIVFFIFHVGISYALIMLPGFYLFMVDRYLRFLQSRRQVRLVSARVLPCEAVELNFSKGHGLTYNPTSVMFINVPSISKLQWHPFTVTSNNNLEADKLSVXXKSEGPWTNKLYQLLSTPSTIDRLSVSVEGPYGPASTNYLRHDTLVMVSGGSGITPFISIIRELIHLNTIFKCKTPKVVLICAFKNSSSLSMLELILPINGXPSDISNLELQIEAYITRDKEPKADGPIHPQIRWFKPNPSDEPVHAILGPNSWLWLGAIISSSFVVFLILIGIITRYYIFPIDHNSNXIFSYPLNAFLNMLVICVSIASVSTAAFLWNKKYYAKEGKQIQNMEGSTPTVSPNSMVYNVDRELESLPYQSLIQATNVHYGVRPDLRKILFXHKGSSVGVLASGPKTMRHEVAAICSSSXLAENLHFESISFSW* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0549 719 CDD NOX_Duox_like_FAD_NADP 336 515 - -
Vra9g0549 719 Gene3D - 422 542 IPR039261 -
Vra9g0549 719 PANTHER FERRIC REDUCTION OXIDASE 2 20 718 - -
Vra9g0549 719 Pfam Ferric reductase NAD binding domain 438 702 IPR013121 GO:0016491
Vra9g0549 719 Pfam Ferric reductase like transmembrane component 181 300 IPR013130 -
Vra9g0549 719 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 329 434 IPR017927 GO:0016491
Vra9g0549 719 PANTHER NADPH OXIDASE 20 718 - -
Vra9g0549 719 SFLD Ferric Reductase Domain 67 719 - -
Vra9g0549 719 SFLD Ferric reductase subgroup (FRE) 22 719 - -
Vra9g0549 719 Pfam FAD-binding domain 333 432 IPR013112 GO:0016491
Vra9g0549 719 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 422 493 IPR039261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0549 Vra-Chr9 5981346 5987180 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0549 19 719 Miscellaneous Gene Families AT1G01580 55.853 0.0 794
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0549 K00521 - gmx:100790114 1222.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0797 4 14834444 14838541 Vra9g0549 9 5981346 5987180 PCT