Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0797 ATGAATGTAGAAGTTGAGAAGAAGTCGCTTTCTGAAGAAAAATATGGCAGGGTTCAATCTGTCATAAGGTGGTTGGTGCTGGTTATGTTTGTGGGATGGATTTTCGTATGGATAATGACTCCCACAAACACTTACCAGCAAAAATTGAAGCATCGTCTTCTAGCAAAGACTGAATCTGTTTTTGATACACAAGGTGCAAATCTTCTGGTTTATACTTCTCCAATCTTGTTCATAGCTGCTTTGGGATGTGTCTACGTTCACATAGCCAAAAAAGGAAAGGATTCCGACATGGAAAAAAGAAAGAAACACGAGGTATCCATATGGAAGCGTTTGGTTCTTGTGAGAGGCCCTCTTGGCATAGTTTCTGCGACAGAACTGGTTTTCTTGTCTATGTTTATAGTTCTCCTCTTATGGTCCTTTTCAATCTATCTGCACATTGGCTTTGCCAAAATCACCCACAAATCAGCAGCAGAACAAGGTGTAAAACTCTGGGAGAAGAGACTAGCTAGTGCAGCTGTGAAATTGGGTTTGGTTGGGAACATATGTTTGGCATTCTTGTTTTTCCCAGTTGTTCGTAGTTCCTCAGTGCTACCACTGGTAGGACTAACACCAGAGAGTTGCATCAAATACCATATTTGGCTAGGACACATTGCCATGACCCTTTTCACAGCTCATGGTATTCTTTTCATCATCTATTGGGCAGTTACTCATCAACTTTCAAAGATGTTGGAATGGAAAAGAAAAGGGATTTCAAATGTGGGGGGAGAGGTATGTTTGGTTGCTGGTTTGTTGATGTGGATTGCAACAATCCCTCGTATTAGGCGTAAAGCTTTTGAGGTCTTCTTCTACACTCACTACCTCTACATCCTCTTCATTCTCTTCTTCATGTTTCACGTTGGCTTCTCCTATGCATGCACCATGCTCCCAGCTTTCTACCTCTTCTTAGTTGATCGCTACCTAAGGTTTCTGCAATCAAGATACCAAGTTCCTCTGATTTCTGCTCGTCTTTTGCCTTGTCAGACTCTACAACTCAACTTCTCCAAGAGCCATGGTTTAACTTATAGCCCCACAAGTATTATGTTCATAAATATACCAAGCATATCCAAGCTACAATGGCATCCATTTACCATTACTTCTAATAGTAATTTGGAGCCAGAAGTGTTGAGTGTTGTCATCAAAGGTGAAGGAACTTGGTCCCAGAAGCTCTACCAAATGCTTTCAAGCCCTTCAGCAATTGATCATCTCAGTGTCTCTGTTGAAGGTCCATATGGACCTGCATCAACCAATTATCTAAGGTATGACACTCTTGTGATGGTTAGTGGAGGGAGTGGAATCACTCCCTTTATCTCCATCATTCGGGAGCTACTGTATTTGAGCACAGCATTCAGATGCCGAACGCCAAAAGTTATCCTAATCTGTGCTTTCAAGAACTCTTCCTATCTCTCAATGCTGGATCTGATCCTTCCAAATTCTGGCACCCCTTTTGATATTTCTAACATGCAACTACAAATTGAGGCCTACATCACAAGAGAGGAGGAGCATGTATTGGAAACTCAAATCCACGTTCAAGATATAAGGTTCAAGCCCAAGGCAACAGATGCACCCATATCTGCTATTTTAGGTCCTAACAGTTGGCTTTGGCTGTGTGCTATAATCTCATCCTCGTTCATTATTTTCCTTGTCCTAATTGGGATCATTACACGATACATCATTTTCCCAGTAGACTACAATTCTAATAAACCATTTTCACAATCTTTGGGGTCATTCCTCAGCATGCTAGCAATATGTGTGTCCATAACAATGGCTGCTAGTGTAGCTGTTCTTTGGAACAAGAAACACAACGATGTAGAAGCAAAGCAGATTCAGAACTTAGAAGGGGCACCATCGGCAGATAAAGAAGTGGAAAGCCTACCCCACCAATCCCTTATTCAAGCTACAAAAGTGCATTTTAGTGTAAGACCTGATCTGAGAAGAATGCTAATGGAAGTTGAAGGAACAAGAGTTGGAGTTTTTGTTTCGGGACCAAAGAAGATGAAGCAGGAGGTTGCAGGCATTTGCTCATCTGGTTTAGCAGAAAATCTGCATTTTGAATCTTATAGCTTTAGCTGGTAA 2112 0.4143 MNVEVEKKSLSEEKYGRVQSVIRWLVLVMFVGWIFVWIMTPTNTYQQKLKHRLLAKTESVFDTQGANLLVYTSPILFIAALGCVYVHIAKKGKDSDMEKRKKHEVSIWKRLVLVRGPLGIVSATELVFLSMFIVLLLWSFSIYLHIGFAKITHKSAAEQGVKLWEKRLASAAVKLGLVGNICLAFLFFPVVRSSSVLPLVGLTPESCIKYHIWLGHIAMTLFTAHGILFIIYWAVTHQLSKMLEWKRKGISNVGGEVCLVAGLLMWIATIPRIRRKAFEVFFYTHYLYILFILFFMFHVGFSYACTMLPAFYLFLVDRYLRFLQSRYQVPLISARLLPCQTLQLNFSKSHGLTYSPTSIMFINIPSISKLQWHPFTITSNSNLEPEVLSVVIKGEGTWSQKLYQMLSSPSAIDHLSVSVEGPYGPASTNYLRYDTLVMVSGGSGITPFISIIRELLYLSTAFRCRTPKVILICAFKNSSYLSMLDLILPNSGTPFDISNMQLQIEAYITREEEHVLETQIHVQDIRFKPKATDAPISAILGPNSWLWLCAIISSSFIIFLVLIGIITRYIIFPVDYNSNKPFSQSLGSFLSMLAICVSITMAASVAVLWNKKHNDVEAKQIQNLEGAPSADKEVESLPHQSLIQATKVHFSVRPDLRRMLMEVEGTRVGVFVSGPKKMKQEVAGICSSGLAENLHFESYSFSW* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0797 703 SFLD Ferric reductase subgroup (FRE) 18 703 - -
Vra4g0797 703 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 417 488 IPR039261 -
Vra4g0797 703 Gene3D - 585 702 IPR039261 -
Vra4g0797 703 PANTHER FERRIC REDUCTION OXIDASE 2 19 702 - -
Vra4g0797 703 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 324 429 IPR017927 GO:0016491
Vra4g0797 703 PANTHER NADPH OXIDASE 19 702 - -
Vra4g0797 703 Pfam FAD-binding domain 328 427 IPR013112 GO:0016491
Vra4g0797 703 Gene3D - 417 541 IPR039261 -
Vra4g0797 703 CDD NOX_Duox_like_FAD_NADP 331 510 - -
Vra4g0797 703 Pfam Ferric reductase NAD binding domain 433 687 IPR013121 GO:0016491
Vra4g0797 703 SFLD Ferric Reductase Domain 64 703 - -
Vra4g0797 703 Pfam Ferric reductase like transmembrane component 175 295 IPR013130 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0797 Vra-Chr4 14834444 14838541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g0797 3 703 Miscellaneous Gene Families AT1G01580 54.608 0.0 783
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0797 K00521 - gmx:100814642 1102.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0797 4 14834444 14838541 Vra9g0549 9 5981346 5987180 PCT