Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0545 ATGATAAAGCTTTTGGGGTTTCAATTCATCATCTTGAAAAACATGTCCATCATGAAGAACCATTTCAAAGACCCTGAACATTTATACTCTCCATGGAGCTTCTCAAAGCTCACGGCTTTCTTCTTCCTCTTAATCTCCATCTCCTACCTCTTCTACTCCCTCAGATTCGTCAGCCACTCCTATGACTGTGATCAACCACCCCACATTCCCACCATCACTCACCACCACACATCCAACCCCCCACCTCAACAAAAGCCTCCACCTTTTGAAGAAACCAACCTTTCCCACATAGTCTTTGGCATAGGGGCCTCGGCCAAGCTCTGGAAGCAGCGAAAGGAGTACATCAAGATGTGGTGGAGGCCCAATGAGATGCGTGGAGTTGTGTGGTTGGAGCAGAGGGTGAAGACTGAACCCGGTGATGAAAATTCCTTACCCTTGTTGAGGATCTCCGGTGACACTTCAAGGTTCAAGTATAAGAATCCAAAGGGGCATAGATCGGCGATTAGAATCTCACGCATAGTGTCTGAGACTCTGAGGCTTGGGATGAAAGATGTGAGGTGGTTCGTGATGGGGGATGATGACACCGTTTTTGTGGCAGAAAATCTGGTGAAGGTTTTGCAGAAGTATGACCATAAGCAGTTCTATTACATTGGGAGTTCTTCAGAGAGTCATTTGCAGAATATATACTTTTCTTACAATATGGCTTATGGGGGTGGTGGTTTTGCCATCAGTTATCCTTTGGCTGTGGCATTGGAGAAAATGCAAGATAGGTGCATTCAGAGGTACCCTGGCCTGTATGGTTCTGATGACAGAATTCAAGCTTGTATGGCAGAATTAGGAGTTCCTCTCACCAAGGAGAAAGGCTTCCATCAGTTCGATGTGTACGGCAATCTCTTTGGGCTTCTGGCGGCCCATCCACTTACACCGCTGGTATCCCTACATCACTTGGACGTGGTAGAGCCCATATTTCCAAACGTGAGCCGGGTGCGGGCTCTGGAGCGGCTGAACGGGCCCATGAAGCTGGACCCAGCCGGGCTCATGCAGCAATCTATTTGCTACGACAAGGGTCGGACCTGGACCGTATCCGTTTCGTGGGGATACGCGGTTCAAATATTCCGGGGCATTTTCTCGGCCAGGGAAATGGAGATGCCGGCGAGGACGTTCCTCAACTGGTACAGACGGGCCGATTACACGGCGTACCCGTTCAACACCCGCCCTGTCAGCCGCCATGTTTGTCAGAAACCTTTTGTCTATTTCTTGTCAGAGGCAGTGTATGACAGTGCTGCAAATGAAACTTCAACCCATTACATTCGGGTTCAGGAAAACCCCGATTGCAAGTGGAAAATGGAGGATCCGACCCGGATCAAATCGGTGGAAGTTCGTAAGAAAATCGACCCGCATTTGTGGGATAAGGCTCCAAGAAGAAATTGTTGTAGGGTTCGACGCACGAAGAAGAAAGGAACTATGGTGATTGATGTTGGGGAATGCAGGGCAGATGAAGTTGTTGAATTGTAG 1515 0.4871 MIKLLGFQFIILKNMSIMKNHFKDPEHLYSPWSFSKLTAFFFLLISISYLFYSLRFVSHSYDCDQPPHIPTITHHHTSNPPPQQKPPPFEETNLSHIVFGIGASAKLWKQRKEYIKMWWRPNEMRGVVWLEQRVKTEPGDENSLPLLRISGDTSRFKYKNPKGHRSAIRISRIVSETLRLGMKDVRWFVMGDDDTVFVAENLVKVLQKYDHKQFYYIGSSSESHLQNIYFSYNMAYGGGGFAISYPLAVALEKMQDRCIQRYPGLYGSDDRIQACMAELGVPLTKEKGFHQFDVYGNLFGLLAAHPLTPLVSLHHLDVVEPIFPNVSRVRALERLNGPMKLDPAGLMQQSICYDKGRTWTVSVSWGYAVQIFRGIFSAREMEMPARTFLNWYRRADYTAYPFNTRPVSRHVCQKPFVYFLSEAVYDSAANETSTHYIRVQENPDCKWKMEDPTRIKSVEVRKKIDPHLWDKAPRRNCCRVRRTKKKGTMVIDVGECRADEVVEL* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0545 504 PANTHER FRINGE-RELATED 15 503 - -
Vra9g0545 504 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 15 503 - -
Vra9g0545 504 MobiDBLite consensus disorder prediction 68 89 - -
Vra9g0545 504 Pfam Protein of unknown function, DUF604 226 478 IPR006740 -
Vra9g0545 504 Gene3D - 84 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0545 Vra-Chr9 5928523 5932062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0545 35 497 Glycosyltransferase AT5G41460 66.189 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0545 - - gmx:100789583 892.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0799 4 14857480 14860147 Vra9g0545 9 5928523 5932062 PCT