Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0799 ATGTCCACCATGAAAAGAAACCTCAAGGATCAAGAACACTACTTCCACTCTTCATGGACCATAGCAAAACTAATCACCTCCTTCTTCCTCTTGGTTTCAATCTCCTACCTCTTCTACTCCCTTGGATTCATAACTCATTCACACGATTGTCCTCAAAAAAAGCCTTACCCTCTTTCCACAACCACACACGTTTCCAACACCACCATCACTCCTCCACCACCTCAGCACACAGCAAAACCCTCTGAGAAAACCAACATTTCACACATAGTGTTTGGCATAGCAGCCTCTTCCAGGCTCTGGAGGCAAAGAAAAGAGTACATGAAGCTATGGTGGAGGCCAAACGAGACAAGGGGAATAGTGTGGCTAGACCAAGAAGTGAAAAGTGAAGCAGGTGATGAGACCCTCTTGCCAACATTGAGAATATCGAGTGATGTCTCAAAGTTCAAGGTGAAGAATCCAGGTGAGGAGTTGGGGGTTCGTATATCTCGAATTGTGTCGGAGACAGTGAGGCTTGGGATGAAGAATGTGAGGTGGTTTGTGATGGGAGATGATGACACTTTCTTTGTGACTGAGAATTTGGTGAAGGTGTTGCAGAAGTATGATCACAACCAGTTTTATTACATAGGGGCAAACTCAGAGAGCCACTTGCAGAACATTCACTTTTCCTATAACATGGCTTATGGGGGTGGAGGTTTTGCCATAAGTTACCCTTTGGCTGTGGCATTGGAGAGAATGCAGGACCAGTGCCTTCAGAGATACCCTGCATTGTTCGCCTCAGATGATAGGATCCAGGCTTGTATGGCAGAACTCGGTGTCCCTCTCACCAAGGAAATTGGCTTTCACCAGTTTGATGTATATGGCAGCGTGTTTGGGCTCTTAGCAGCACATCCCGTTACACCTTTAGTTTCGATGCATCACTTGGACGTGGTTGAGCCCATATTCCCGAACGTGAACCGTGTGGAGGCCCTACAGAAGCTTATTGGGCCCATGAGACTGGACTCCTATGGGCTCATGCAGCAATCCATATGCTACGACAGAGCCCGGCACTGGACCGTTTCCGTTTCATGGGGTTATGCGGTTCAAATATTCCGGGGCATTTTCTTGGCCCGGGACATGGAGATGCCCGGCAGAACCTTTCTGAATTGGATCCGGCGGGCGGATTATACCGGATTTCCATTCAACACGCGCCCTTTCAGCCGGAATGCTTGCCTGAAACCTTTTGTTTTCTACTTGGACAATGCCATCTACGATGGGGTTGCTGATGAGACTGTCAGTGACTATGTTCGGGTCCAGCCCAACCCGGATTGCAGGTGGAAAATGCCAGATCCGACCCAAATCTCAATGATTAGGGTTTATAAGAAACTCGATTCGCATTTGTGGGACAAGTCTCCGAGGAGAAATTGTTGCAGGTTTCGACCAACAGAGGAGGAAGGAAGTATGGTGATTGAAGTGGGAGAATGCAGAAAAGATGAATTTGCTAATTAA 1485 0.4754 MSTMKRNLKDQEHYFHSSWTIAKLITSFFLLVSISYLFYSLGFITHSHDCPQKKPYPLSTTTHVSNTTITPPPPQHTAKPSEKTNISHIVFGIAASSRLWRQRKEYMKLWWRPNETRGIVWLDQEVKSEAGDETLLPTLRISSDVSKFKVKNPGEELGVRISRIVSETVRLGMKNVRWFVMGDDDTFFVTENLVKVLQKYDHNQFYYIGANSESHLQNIHFSYNMAYGGGGFAISYPLAVALERMQDQCLQRYPALFASDDRIQACMAELGVPLTKEIGFHQFDVYGSVFGLLAAHPVTPLVSMHHLDVVEPIFPNVNRVEALQKLIGPMRLDSYGLMQQSICYDRARHWTVSVSWGYAVQIFRGIFLARDMEMPGRTFLNWIRRADYTGFPFNTRPFSRNACLKPFVFYLDNAIYDGVADETVSDYVRVQPNPDCRWKMPDPTQISMIRVYKKLDSHLWDKSPRRNCCRFRPTEEEGSMVIEVGECRKDEFAN* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0799 494 Pfam Protein of unknown function, DUF604 217 469 IPR006740 -
Vra4g0799 494 PANTHER FRINGE-RELATED 1 493 - -
Vra4g0799 494 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 1 493 - -
Vra4g0799 494 Gene3D - 76 329 - -
Vra4g0799 494 MobiDBLite consensus disorder prediction 62 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0799 Vra-Chr4 14857480 14860147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g0799 21 489 Glycosyltransferase AT5G41460 58.012 0.0 596
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0799 - - pvu:PHAVU_008G059900g 918.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0799 4 14857480 14860147 Vra9g0545 9 5928523 5932062 PCT