Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0509 ATGTCGCAGTTGTTGAATAAAGCGAAGAACTTCGTGTCGGAGAAGGTAAACGAGATGGCGAAGCCTGAGGCGAGTGTGAGCAACGTGGACTTCAAGCGCGTGAGCAAAGATAGTATGGAGTACTTGGTGAAGGTAGCTGTCCGTAACCCTTATTCAACTTCCATACCCATCTGCGAGATCAGATACTCTTTCAAAAGCGCGTCAAGGGAGATAGCATCAGGGACAATTCCAGACCCAGGATCTTTGAAGTCAAAGGACACGACCATGGTGGATGTGCCAATTAAGGTTCCATACAGCATATTAATGTCCTTAGCAAGGGACATTGGTGCCGACTGGGACATCGACTACCAACTCGATATTCGTCTCATTATTGACCTTCCTGTCATTGGCAACTTCACCATTCCTCTCTCTCACACCGGAGAGATCAAGCTTCCAACCCTCTCTACCATGTTTGCCTAA 459 0.4749 MSQLLNKAKNFVSEKVNEMAKPEASVSNVDFKRVSKDSMEYLVKVAVRNPYSTSIPICEIRYSFKSASREIASGTIPDPGSLKSKDTTMVDVPIKVPYSILMSLARDIGADWDIDYQLDIRLIIDLPVIGNFTIPLSHTGEIKLPTLSTMFA* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0509 152 PANTHER - 1 152 IPR045043 -
Vra9g0509 152 PANTHER DESICCATION PROTECTANT PROTEIN LEA14 1 152 - -
Vra9g0509 152 Pfam Late embryogenesis abundant protein 44 140 IPR004864 -
Vra9g0509 152 SMART why 24 141 IPR013990 GO:0009269
Vra9g0509 152 Gene3D - 17 151 - -
Vra9g0509 152 SUPERFAMILY LEA14-like 2 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0509 Vra-Chr9 5360832 5362520 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0509 - - gmx:547533 266.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0509 9 5360832 5362520 Vra9g0509 9 5360832 5362520 ECH
Vra4g0819 4 15121367 15122517 Vra9g0509 9 5360832 5362520 PCT