Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0819 ATGCGAGCGAGTTTTGGTGTTAAGGTATCGCTTGGTGTTATCGGTGTGAGTGTGATATTTGCAGTGCTGAAAATGTCGCAGTTGTTGGACAAAGCTAAAACTTACGTTGCGGACAAAGTGGCGAACATGCCGAAGCCAGAGGCGACGGTGGCCGACGTCGATTTCCAAAAGGTCAGCCGCGACAGCGTCCAGTACTTGGCCAAGGTTTCTGTCTCTAATCCTTATGCCACTCCCCTCCCTATTTGTGAGATCAAGTACTCCTTAAAAAGTGCAGACAGGGAGATAGCATCAGGGACGATACCTGACCCAGGGTCGTTGAAGGCGAAGGACTCAACAATGTTGGATGTGCCAGTGAAGGTGCCACACACGGTGTTACTGAGCTTGGCAAGGGACATTGGTGCAGATTGGGACATTGATTATCAGTTGGATATTTGGCTCATCATTGACCTTCCTGTCGTTGGCAACATTACCATTCCTCTTTCTCAGAAGGGAGAGATCAAGCTCCCAACCATCAGAGACATGTTTGCCTAA 531 0.4896 MRASFGVKVSLGVIGVSVIFAVLKMSQLLDKAKTYVADKVANMPKPEATVADVDFQKVSRDSVQYLAKVSVSNPYATPLPICEIKYSLKSADREIASGTIPDPGSLKAKDSTMLDVPVKVPHTVLLSLARDIGADWDIDYQLDIWLIIDLPVVGNITIPLSQKGEIKLPTIRDMFA* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0819 176 PANTHER - 16 175 IPR045043 -
Vra4g0819 176 Pfam Late embryogenesis abundant protein 68 164 IPR004864 -
Vra4g0819 176 Gene3D - 41 175 - -
Vra4g0819 176 SUPERFAMILY LEA14-like 25 174 - -
Vra4g0819 176 SMART why 48 165 IPR013990 GO:0009269
Vra4g0819 176 PANTHER DESICCATION-RELATED PROTEIN LEA14-RELATED 16 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0819 Vra-Chr4 15121367 15122517 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0819 - - var:108328368 335.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0819 4 15121367 15122517 Vra4g0819 4 15121367 15122517 ECH
Vra4g0819 4 15121367 15122517 Vra9g0509 9 5360832 5362520 PCT