Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0370 ATGGCAACCTTAAGAGTGTTTGTTGTGTTGGTTCTCTTTGTTCTGAACATTCATCACTCTCATTCTGAAAACAGCACCATTTTCATATTTGGAGACTCTCTACATGATTATGGAAACACTAAGTACTTTTTAGCCGTCCCATTTTTCCAAGGCAACTTCCACCCATATGGACTAACTTTCTTCAACTTTCCCACTGGAAGAATATCCGATGGACGTTTCATTTCAGATGTTATTGTTCGCTTGTCGAAGTCTTCACGTCAGACATTCGTGAATGCTTTCCGGCTTAGTGGTGATGCAGTCAACTTTTATGTTCTTGGGGCTAGAGGAGCTCTGATTGAAACTAAAGAAGAATTGGTGATGGACTTGACAACTCAAGGATCGTACTTTACAAGAGTTAGCAGGGAATTGAGACAGCAACTTGGAGAAGACAAAGCCAGAAGATTGTTGTCCACAGCTGTTTATATATTTTCCGTTGGAGCCAATGACTATTCAAACCCCATCAATGTCACTTTTCCATACTCTCAACAAAATATTCTAGAATTCGTCATTGGCAACATTACAACAGTGATCAAAGGAATTTACAATGAAGATGGAAGAAAATCGATTCTAAATCTTCCTGCTCTGAGTTGTGTTACGTCACTAAGGCCACTCGTGAATGGAACAACTATAGAAGAATGTGTTGCAGCACAAGCTTCTGCTCTTGCCAGACTACACAATATTACTCTTTCCAGATCTTTTCAAAACCTAGCAAGACAATTAAGCGGATTCAAATACTCAATTTTTAATTTCTATGATATATTGCAGGAAATGATCAAGTATCCTTCAAAATATGGTTTCAAAGAGGGGAGTGTGGCTTGTTGTGGAGATGGACCCTACAGAGGAGATTATAGTTGTGGAGGGAGAAGGGGTATCGAAGAATATAAATTATGCAGCGATCCTGGTGAGTACGTGTTCTTTGAATCTCTTCATCCATCGGATAAAGCTAATGAACATTTCGCTCAGCTAATGTGGAATGGTACCAGAGATGTGATTGAGTCTTACAATCTGAAGCAGTTGTTCAACCTTGAATAA 1071 0.3922 MATLRVFVVLVLFVLNIHHSHSENSTIFIFGDSLHDYGNTKYFLAVPFFQGNFHPYGLTFFNFPTGRISDGRFISDVIVRLSKSSRQTFVNAFRLSGDAVNFYVLGARGALIETKEELVMDLTTQGSYFTRVSRELRQQLGEDKARRLLSTAVYIFSVGANDYSNPINVTFPYSQQNILEFVIGNITTVIKGIYNEDGRKSILNLPALSCVTSLRPLVNGTTIEECVAAQASALARLHNITLSRSFQNLARQLSGFKYSIFNFYDILQEMIKYPSKYGFKEGSVACCGDGPYRGDYSCGGRRGIEEYKLCSDPGEYVFFESLHPSDKANEHFAQLMWNGTRDVIESYNLKQLFNLE* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0370 356 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 7 354 IPR044552 -
Vra9g0370 356 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 7 354 - -
Vra9g0370 356 Pfam GDSL-like Lipase/Acylhydrolase 27 335 IPR001087 GO:0016788
Vra9g0370 356 Gene3D SGNH hydrolase 15 342 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0370 Vra-Chr9 3118233 3120822 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0370 26 354 Acyl Lipid Metabolism Gene Families AT4G10950 27.114 4.65e-27 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0370 - - vra:106773104 711.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0370 9 3118233 3120822 Vra9g0370 9 3118233 3120822 ECH
Vra9g0370 9 3118233 3120822 Vra5g0020 5 214039 215621 PCT