Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0252 ATGACTGATAGGGTTCATCCTTCTGCCAAAACCACCGCCAACGGCGGACCCAAGCCAACATTCCCGGCCACAAAATCCCAACTTTCCGGCGCCAATCGCCCCACCTACCGCCCCCAACCTCCCCGCCGACGCAGCCGCGGCCGCGGCTGCGTCTCCACCTTATGCTGCTACCTCTTCATGATCCTCCTGCTCCTCCTCCTTCTCATCGGCGGAGCCGGAACCGTCCTCTACTTCCTCTACCACCCACAACGCCCCTCCTTCTCCGTCACCTCCCTCAAACTCTCCTACTTCAACCTCACCTCTCCCTCCACCTTCAACGCCAAGTTCGACCTCACTCTCTCAACCACCAACCCCAACGACAAGATCCTCTTCTCCTACGACCCCACCTCCGTCTCCCTCCTTTACGACGACGCCACGATCGCCACTGCTACCATCCCCTCCTTCCTCCACCACCAGAAGAACACCACCGTCCTCGAGGCCTACGTCACGAGCACCGATGAAGAGGTGCAGAGCGACACCGTAACGGAACTGAAGAGGAGCACGAAGGGCAAGAGCGAGGTGGCGCTAAAGGTGAAGTTGGAGACGAAGGTGGAGGCCCAGATGGGTGTATTCCAAACCCCGGGCGTCGGAATCACCGTTTTGTGCGACGGCATCGCTGTGTCTCTCCCCGACGGCGAGAAACCGGCTTCGGCGTCGGTAGAGAATACGGCGTGCGAAGTGGATGCGAGGTTCAAAATCTGGAAATGGACTGTAGGATAA 759 0.5929 MTDRVHPSAKTTANGGPKPTFPATKSQLSGANRPTYRPQPPRRRSRGRGCVSTLCCYLFMILLLLLLLIGGAGTVLYFLYHPQRPSFSVTSLKLSYFNLTSPSTFNAKFDLTLSTTNPNDKILFSYDPTSVSLLYDDATIATATIPSFLHHQKNTTVLEAYVTSTDEEVQSDTVTELKRSTKGKSEVALKVKLETKVEAQMGVFQTPGVGITVLCDGIAVSLPDGEKPASASVENTACEVDARFKIWKWTVG* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0252 252 PANTHER CHAPERONIN CPN60-LIKE PROTEIN 1 250 - -
Vra9g0252 252 Pfam Late embryogenesis abundant protein 112 211 IPR004864 -
Vra9g0252 252 SUPERFAMILY LEA14-like 62 165 - -
Vra9g0252 252 Gene3D - 78 209 - -
Vra9g0252 252 MobiDBLite consensus disorder prediction 1 48 - -
Vra9g0252 252 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 1 250 - -
Vra9g0252 252 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0252 Vra-Chr9 1863067 1864270 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0252 36 239 EF-hand Containing Proteins AT5G21130 25.701 5.71e-16 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0252 - - gmx:102669753 368.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2533 5 32182062 32183420 Vra9g0252 9 1863067 1864270 PCT