Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0230 ATGGCTGAGATTATGCTCATTTTTGACTTTGACTCAACAATCATTGAGTGTGACAGTGATAATTGGGTGCTTGATGACACTGCTTTAACTCAAAAGTTCTACCAGCTTCTTCCTAGCATGCCTTGGAACCCTCTCATGGATAGAATGATGAAAGAACTTCATTCACAAGGAAAAACCATTGAAGACATTGTTGAAATTCTGAAGAGGACACCAATGCATCCTTGCATTGTTCCTGCTATTGAGGCAGCTTATTCCCTTGGGTGTGATTTGAAGATTGTGAGTGATGCAAATAGTTTCTTCATTGAGACAATTCTGCAGCATCATGGAGTGTGGAACTGTTTCTCAGAGATTATTTGCAACCCCAGCTATGTCAAAGAAGGGAGTCTCAACATTTGTCCATACCATGATTATCTAAAATCTTCCCATGGATGCAATCTTTGTCCACCAAACATGTGCAAGGGATTGGTGATAGAAAGGATCCAAAAGTCCCTGGCAGAAGCAGGAAAGAAGAAAGTGATCTATGTTGGAGATGGAAATGGAGATTTTTGCCCAAGTTTGAAGCTAAAAGAAAGTGACTTTTTGATGCCAAGAACAGGCTTTCCACTGTGTGATTTAGTTTCAAAAAATTGCAATCAGATAAAGGCAGAAGTGCATGGTTGGAGAGATGGGAAAGAGCTTCAACATGTTCTACTCAATCTCATCAACAAAGCTATTGAAGAAGGAAACAACACCATTAACAATAATACTCTTCAAACAATCTCAGTTGATTGCAAGTTGCTGCCAACTCCAATTCCAATTGACACTCATCAACCTTTGCCAAAAGCTCTCTCAGTTCCTCAATAA 843 0.395 MAEIMLIFDFDSTIIECDSDNWVLDDTALTQKFYQLLPSMPWNPLMDRMMKELHSQGKTIEDIVEILKRTPMHPCIVPAIEAAYSLGCDLKIVSDANSFFIETILQHHGVWNCFSEIICNPSYVKEGSLNICPYHDYLKSSHGCNLCPPNMCKGLVIERIQKSLAEAGKKKVIYVGDGNGDFCPSLKLKESDFLMPRTGFPLCDLVSKNCNQIKAEVHGWRDGKELQHVLLNLINKAIEEGNNTINNNTLQTISVDCKLLPTPIPIDTHQPLPKALSVPQ* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0230 280 SUPERFAMILY HAD-like 5 185 IPR036412 -
Vra9g0230 280 PIRSF PLP_phosphatas_PHOSPHO2 1 238 IPR016965 GO:0016791
Vra9g0230 280 PANTHER PHOSPHATASE, ORPHAN 1, 2 1 280 IPR016965 GO:0016791
Vra9g0230 280 Gene3D - 2 190 IPR023214 -
Vra9g0230 280 TIGRFAM DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 4 197 IPR006384 GO:0016791
Vra9g0230 280 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 6 186 - -
Vra9g0230 280 Pfam Putative Phosphatase 4 234 IPR016965 GO:0016791
Vra9g0230 280 PANTHER 2,3-DIKETO-5-METHYLTHIO-1-PHOSPHOPENTANE PHOSPHATASE 1 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0230 Vra-Chr9 1659028 1661186 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0230 K13248 - gmx:100785357 476.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0230 9 1659028 1661186 Vra5g2513 5 32056033 32057777 PCT