Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0203 ATGGAAAGAATAATTAGGTTTTTTGGTTCGATAACGAAAGAGGAAAAGGGTATGAAGCCTTTTCTTCTGAAATGTGGTTTGGCTTTGGCTCTTACCTTTGCTGGACTTCTCTACTCTCATATCGGAGCCAAGAGAATCAAACCTTCTCCTACTTCCCCCAAGGGGCAACCTTCAGGTCATGGAAGCGAAGATAATTTCGTAAGAGGTAAAAGGGCTGCTTCTAGTTCAGAGGAAAATGTTTTGGATGCTGTAAGTGACATGAAAAAGACTATCTGTCCTGAATTTAATGATCCTATCAAGGATGCTGAATTTGGAGTCACCATTGAAGGTAGTTCTTTTAAGAAAGAGGTAGAAACACCAAGGTCAAAAGTAGGATCTCCTATGGCATATGCAAATGTTGACAAAGATGACTATGAGAAAGAGATCAGGAACCTCAGGAGCATGATCAGAATGCTTCAAGAGAGGGAAAGAAACCTTCAGTTTCAACTGCTTGAGTACTGTGGCATTAAAGAGCAACAAGCAGCAGTGATGGAGCTCCAAAATAGATTAAAGATAAGTAATATGGAGGCTAAGATGTTCAATCTGAAGGTTGCGACCTTGCAGTCTGAGAATCGGAGATTGGAGGTACAAGTGGCTGATCATGCAAAACTGGTATCTGAGCTTGAGACTGCAAAAACGAAAGTTAAGTTTTTGAAGAAGAAAATTAAGTATGAAGCTGAACAGAATAGGGAGCATATCATGAATCTTAAGCAAAAAGTTGCCAAGTTGCAGGATCATGAATTTAAAGTTGCTGCTAACGAACAAGAGATTCAAATTAAGCTGAAAAGGCTTAATGATCTTGAGTGTGAGATAGAGCAGTTGAGAAAATCTAATTTGAGACTCCAGATAGAAAATTCTGACTTATCTCGAAGATTGGATTCTACTCAGCTCCTTGCAAATGCTGTTCTAGAAGATCCTGAGGCACAAGCTCTGAAGGAAGAAGGTGAACGTCTCAGACAAGAGAATGAAGGGTTGACGAAAGAACTTGAGCAATTACATGCAGATAGATGTTCAGATCTTGAAGAGTTAGTTTATTTGCGGTGGATAAATGCTTGCTTAAGACATGAACTACGAAGTTATCAGCCCCCACCTGGTAAAACAGCAGCAAGGGACTTAAGTAAAAGCTTGAGTCCTACCTCTGAGAAGAAAGCCAAGCAACTTATACTTGAATATGCAAACAATGATGGGCGAGGGAGCGTTTCTGATGTGGAATCTGACCAATGGTTCTCTTCACAGGCTTCTTGTTTCACAGACTCAGGTGAGCATGATGATTATTCTCTTAATGATACTTCATCTGAGGCCAAAGCTAACAATCCAAGCAAGTCAAAGATTTTTGGCAAGCTTATGAAGCTGATACGAGGCAAAGACAGCCAGAACCAACGTGATCGAGTTATATCTAAAGAAAAATCAATTTCCCGGGTAGATAGCAGTTCACATTTCAGCTTGAGTATGTCAACTGGACATGAGTGTCTTAGGAGCGAATATACAACTCCCTCTGTCACTTCTAGAACTTCCTTTGATTATAACCAAGCCACGAGTATGAAGGATGATAGTAGGAGAAATTCATATAGCCATACCCCAGGAAGCTCCAAGAATTTCAGTCCAATGAGAAGAAGTTCAGCAGATTCCAAAAACCGCCTCGATTCTTTCTCAGAATCCTCTGACATGGAGAAAACTAATTTGGTCAAATATGCTGAAGCTTTAAAAAATTCCAGTGAAGCCCCCAAACATAAATCACACAGAAGATCAGCAGCATATAGTTCATTTTAA 1809 0.4002 MERIIRFFGSITKEEKGMKPFLLKCGLALALTFAGLLYSHIGAKRIKPSPTSPKGQPSGHGSEDNFVRGKRAASSSEENVLDAVSDMKKTICPEFNDPIKDAEFGVTIEGSSFKKEVETPRSKVGSPMAYANVDKDDYEKEIRNLRSMIRMLQERERNLQFQLLEYCGIKEQQAAVMELQNRLKISNMEAKMFNLKVATLQSENRRLEVQVADHAKLVSELETAKTKVKFLKKKIKYEAEQNREHIMNLKQKVAKLQDHEFKVAANEQEIQIKLKRLNDLECEIEQLRKSNLRLQIENSDLSRRLDSTQLLANAVLEDPEAQALKEEGERLRQENEGLTKELEQLHADRCSDLEELVYLRWINACLRHELRSYQPPPGKTAARDLSKSLSPTSEKKAKQLILEYANNDGRGSVSDVESDQWFSSQASCFTDSGEHDDYSLNDTSSEAKANNPSKSKIFGKLMKLIRGKDSQNQRDRVISKEKSISRVDSSSHFSLSMSTGHECLRSEYTTPSVTSRTSFDYNQATSMKDDSRRNSYSHTPGSSKNFSPMRRSSADSKNRLDSFSESSDMEKTNLVKYAEALKNSSEAPKHKSHRRSAAYSSF* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0203 602 Coils Coil 135 162 - -
Vra9g0203 602 MobiDBLite consensus disorder prediction 519 602 - -
Vra9g0203 602 PANTHER FAMILY PROTEIN, PUTATIVE-RELATED 8 602 - -
Vra9g0203 602 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 8 602 IPR040265 -
Vra9g0203 602 Coils Coil 169 234 - -
Vra9g0203 602 MobiDBLite consensus disorder prediction 373 393 - -
Vra9g0203 602 MobiDBLite consensus disorder prediction 519 553 - -
Vra9g0203 602 Coils Coil 239 259 - -
Vra9g0203 602 Coils Coil 263 304 - -
Vra9g0203 602 Coils Coil 321 348 - -
Vra9g0203 602 MobiDBLite consensus disorder prediction 47 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0203 Vra-Chr9 1422459 1425836 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0203 - - gmx:100781632 840.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0203 9 1422459 1425836 Vra9g0203 9 1422459 1425836 ECH
Vra5g2491 5 31874687 31877965 Vra9g0203 9 1422459 1425836 PCT