Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2491 ATGAGATATTTGTCTCTCTTCAAGGCTAAAAGAGAAATTAGATTAATTGTGAGGACGATGATCGGACAGGAAAAGGGTGTGAAGCCTGTTCTGCTTAAATTTGGTTTGGCTTTGGCTCTTTCGTTTGCTGGATTTCTCTACTCACGCTTCAGAATCAGAAGAATCAAGCCCTCCAAGTCACGCAAGAGGGGTTCTTTCGGTAACGAGAGTGAAGTTAATTCAGGAGGAGGCATAGGGGCAGCATTAAGCACTTGCAACACCATTTCAGCAGGAAATTTTCTATGTTCTGAAGAAACTTGCACCGACAGGGTGATAACTGGCAATTGTACTCTTGCTCTCTCTCCTGACAGTACACAAAATGGTGATAGAGATGACTTCCTCCTACCTGAATTTAATGATCTTCTTAAGGTCATAGACTTTGGAGCCACAGTTGTTAGAAATTCTTCTAAAATAAATATGGAAGCACCATGGTTAAAAGAATATGCAGATCCCGAGAAGGATGACTATGAGCAAGAGGTAACTGAACTCCGGCGCATGATTAGAATGCTTCAAGAGAGGGAACACAGTCTTGAGGTTCAACTGCTCGAGTACTGCGGTCTTAGAGAGCAAGAAACAGCAGTGATGGAGCTGCAAAATAGATTGAAAGCAAGTACTGTGGAGGTAAAGATGTTCAATCTGAAGGTTAAGACCTTACAGTCTGAGAATTTGAGACTAAAGGAACAGGTCTCGGATCATGCAAAAGTGCTGGCTGAACTTGAGAGTGCAAAAGCGCAAGTCAAATTACTTAATGAGAAAATTAGGTATGAAGCTGAACAGAACAGGGAGCTGATAATAAGTCTTCAACAAAAAGTTTCCAGGTTGCAAGACCAACAATGCAAAGATGCTGCTTGTGATCAGGACATTCAAGTTAAGCTGCAAAAGCTAAAGGAGCTTGAGTCTGAAGCAGAAGAGTTGAGGAAGTCTAATTTAAGATTGCAGATAGAAAATTCTCACTTAGTTCGAAGATTAGATTCTACCCAAATCCTCGCTAATGCAGTTCTGGAAGACCCAGAGGTAGATGCTTTGAAGCAAGAAAGTGAGTGTCTTAAACAAGAAAATGCACACTTGACGAAGGAAATTGAGCAACTATATTCTGATCGATGTTCAGATCTTGAAGAATTAGTATATATGCGGTGGATAAATGCTTGCTTACGATATGAACTAAGAAACTATGAAGCCCCACCAGGTAAAACGGTTGCAAAGGACTTAAGCAGAAGCTTGAGCCCCACGTCTGAGAGGAAAGCCAAGCAGCTTATACTTGAATATGCAAATGCTGATGGACCAGGGAACATTGTGGACTTTGATATAGATCAATGGTCCTCCTCGCAGGCTTCTTCTCTCACTGACATTGGAGAGTGTGATGATTTTTCTTCTGTAGATAATTCATCTGCTGCCAAAACTAACACCACAAGCCAGACCAAGCTTTTAAGCAAACTTAGACAACTGATACAAGGTAAAGACAGTAGTCATCACCATAGTCATGTTTCATCACAAGAAAAATTCAGACGTCAAAATAGCAATCCTCAACGGCAAAGTACTTCAACTGGAATTGAGGGTCTTAGGAGTGAGTTTGCAACTCCCATTGTCACATCCAGAACTTCCCTTGATTTCTCTAGGTTGACGTGTACTCAGGAAGAAGTAAATAGGAGAAATTCAGATAGCGCTTTCATGGAAAGCTCAAAGAAATTCAGTGCACGTACAAGTGGTTCCTTCTCAGATTCCTTGGGCTTGGAAAAAAATAATTTGGAGAAATACGCAGAAGCTTTAAGAGATTCCAGCGTGAGTGCTAGACAACAAAGACGTAGTAGATCAGCATCATGTAGTTAG 1866 0.411 MRYLSLFKAKREIRLIVRTMIGQEKGVKPVLLKFGLALALSFAGFLYSRFRIRRIKPSKSRKRGSFGNESEVNSGGGIGAALSTCNTISAGNFLCSEETCTDRVITGNCTLALSPDSTQNGDRDDFLLPEFNDLLKVIDFGATVVRNSSKINMEAPWLKEYADPEKDDYEQEVTELRRMIRMLQEREHSLEVQLLEYCGLREQETAVMELQNRLKASTVEVKMFNLKVKTLQSENLRLKEQVSDHAKVLAELESAKAQVKLLNEKIRYEAEQNRELIISLQQKVSRLQDQQCKDAACDQDIQVKLQKLKELESEAEELRKSNLRLQIENSHLVRRLDSTQILANAVLEDPEVDALKQESECLKQENAHLTKEIEQLYSDRCSDLEELVYMRWINACLRYELRNYEAPPGKTVAKDLSRSLSPTSERKAKQLILEYANADGPGNIVDFDIDQWSSSQASSLTDIGECDDFSSVDNSSAAKTNTTSQTKLLSKLRQLIQGKDSSHHHSHVSSQEKFRRQNSNPQRQSTSTGIEGLRSEFATPIVTSRTSLDFSRLTCTQEEVNRRNSDSAFMESSKKFSARTSGSFSDSLGLEKNNLEKYAEALRDSSVSARQQRRSRSASCS* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2491 621 Coils Coil 200 241 - -
Vra5g2491 621 MobiDBLite consensus disorder prediction 513 536 - -
Vra5g2491 621 MobiDBLite consensus disorder prediction 570 590 - -
Vra5g2491 621 Coils Coil 166 193 - -
Vra5g2491 621 MobiDBLite consensus disorder prediction 561 590 - -
Vra5g2491 621 Coils Coil 301 328 - -
Vra5g2491 621 MobiDBLite consensus disorder prediction 496 536 - -
Vra5g2491 621 Coils Coil 352 379 - -
Vra5g2491 621 MobiDBLite consensus disorder prediction 605 621 - -
Vra5g2491 621 MobiDBLite consensus disorder prediction 602 621 - -
Vra5g2491 621 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 17 621 IPR040265 -
Vra5g2491 621 PANTHER FAMILY PROTEIN, PUTATIVE-RELATED 17 621 - -
Vra5g2491 621 MobiDBLite consensus disorder prediction 497 512 - -
Vra5g2491 621 Coils Coil 245 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2491 Vra-Chr5 31874687 31877965 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2491 - - gmx:100796238 836.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2491 5 31874687 31877965 Vra5g2491 5 31874687 31877965 ECH
Vra5g2491 5 31874687 31877965 Vra9g0203 9 1422459 1425836 PCT