Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0201 ATGTACAGAGCAGCAGCTTCTTCGTTTAGAAGGCATCTCAAGGGCCATGGAAGCAAGTTGGGATCCACTAGGTCTTCCACTTCAGCCGCTGTAGCTGCAAGGACTTCCAAAGGTGGTTTGTTTAGCTGGCTTACTGGGGAGCGTTCTAGTTCTCTTCCTTCTCTGGATATACCCCTCGGTGGTGTTGTTCTCCCAGATCCACTTCCAGATTCTGTCGAACAAAGCAAGACCAAAATCACAACTCTTTCCAATGGACTTAAAATAGCATCAGAGACCTCGCCTAACCCTGCAGCTTCAATCGGGTTATATCTTGACTGTGGTTCTATCTATGAGACACCATTCTCAAGCGGAGCTTCACACTTGCTGGAGCGAATGGCTTTCAAAAGCACAACAAACCGTAGTCACTTTCGTATTGTAAGGGAAGTAGAAGCAATTGGTGGCAATATAGGAGCATCAGCCTCGCGGGAGCAAATGGGGTACACATTTGATGCCTTGAAAACCTATGTTCCACAAATGGTGGAACTATTGGTTGACTGTGTAAGGAACCCTGCATTCTTGGACTGGGAGGTCAATGAAGAGCTCCGGAAGGTGAAAGCAGAGCTTGGAGAACTGTCAAACAATCCTCAGGGCTTGCTTTTGGAAGCAATTCACTCTGCTGGTTATTCTGGTGCATTGGCTTATCCTCTCTTGGCTCCTGAAGCGGCATTGAACAGATTGGATGGCCCCAGTTTGGAGGAATTTGTTGCTGAGAATTACACTGCACCTAGAATGGTACTTGCAGCAGCTGGGGTTGAGCATGAAGAACTTGTATCTATTGCTGAGCCACTTCTCTCTGATCTACCAAATGTCCCCCGTCCTGATGAACCTAAATCTGTCTATGTTGGAGGTGATTTTCGTCGTCATGGTGAATCAGGGGGTACACATGTTGCTCTTGCTTTTGAAGTGCCTGGTGGATGGCATAAAGAGAAAGATGCTATAGTTTTGACTGTTTTACAGATGCTTATGGGAGGCGGTGGGTCATTTTCAGCAGGGGGCCCTGGAAAAGGGATGCATTCAAGGCTATATCTTCGTGTGCTGAACGAATATCAACAGATTCAATCCTTTTCTGCATTCAACAGCATCTTCAACAATACAGGATTGTTTGGCATTTATGCAAGCACTAGCCCTGATTTTGCGCCAAAGGCTGTGGATATAGCAGCCAAAGAACTAATAGCAATTGCTTCCCCTGGACAAGTTACACAGGTGCAGCTTGACCGAGCCAAAAAATCCACAAAGTCTGCTGTTCTAATGAATCTGGAATCTAGAATGATTGCGTCAGAGGATATTGGAAGGCAGATTTTGACTTATGGAGAAAGGAAGCCTTTGGAACAGTTCCTGAAGGCTGTAGATGAAATCACATTGAACGATATCACCAAAATTTCTCAGAAGATTATTTCCTCACCTTTGACCATGGCATCATATGGGGATGTCCTTAGTGTGCCCAGTTACGAATCTGTAAACAGAAAGTTCCATGCAAAATGA 1521 0.4536 MYRAAASSFRRHLKGHGSKLGSTRSSTSAAVAARTSKGGLFSWLTGERSSSLPSLDIPLGGVVLPDPLPDSVEQSKTKITTLSNGLKIASETSPNPAASIGLYLDCGSIYETPFSSGASHLLERMAFKSTTNRSHFRIVREVEAIGGNIGASASREQMGYTFDALKTYVPQMVELLVDCVRNPAFLDWEVNEELRKVKAELGELSNNPQGLLLEAIHSAGYSGALAYPLLAPEAALNRLDGPSLEEFVAENYTAPRMVLAAAGVEHEELVSIAEPLLSDLPNVPRPDEPKSVYVGGDFRRHGESGGTHVALAFEVPGGWHKEKDAIVLTVLQMLMGGGGSFSAGGPGKGMHSRLYLRVLNEYQQIQSFSAFNSIFNNTGLFGIYASTSPDFAPKAVDIAAKELIAIASPGQVTQVQLDRAKKSTKSAVLMNLESRMIASEDIGRQILTYGERKPLEQFLKAVDEITLNDITKISQKIISSPLTMASYGDVLSVPSYESVNRKFHAK* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0201 506 Pfam Insulinase (Peptidase family M16) 88 232 IPR011765 -
Vra9g0201 506 ProSitePatterns Insulinase family, zinc-binding region signature. 107 130 IPR001431 GO:0004222|GO:0006508
Vra9g0201 506 Gene3D - 67 279 - -
Vra9g0201 506 PANTHER METALLOPROTEASE 16 505 - -
Vra9g0201 506 SUPERFAMILY LuxS/MPP-like metallohydrolase 304 497 IPR011249 GO:0046872
Vra9g0201 506 SUPERFAMILY LuxS/MPP-like metallohydrolase 76 286 IPR011249 GO:0046872
Vra9g0201 506 MobiDBLite consensus disorder prediction 1 27 - -
Vra9g0201 506 PANTHER MITOCHONDRIAL-PROCESSING PEPTIDASE SUBUNIT ALPHA-LIKE 16 505 IPR037715 GO:0006627
Vra9g0201 506 Pfam Peptidase M16 inactive domain 243 422 IPR007863 -
Vra9g0201 506 Gene3D - 291 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0201 Vra-Chr9 1408142 1413450 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0201 K01412 - gmx:100794691 907.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0201 9 1408142 1413450 Vra9g0201 9 1408142 1413450 ECH
Vra5g2488 5 31846282 31850867 Vra9g0201 9 1408142 1413450 PCT