Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2488 ATGTATAGAGCTGCATCTTCACGTCTCACCCTTCTCAAGGGAAATGGGAGAACCGTGGGAGACTCCAGATTTGCTTCGCGAGGTTTATTCAGCTGGATTACTGGGGAATCTTCCAGTTCTCTTCCTCCTCTGGACACCCCATTTAGAGGGTTTCCCCCTCCATCTTCACTGCCAGATTATGTTGAACCAGGAAAGACCAAGATCACAACTCTCTCCAATGGTCTTAAAATAGCATCAGAAACCTCACCGAACCCTGCTGCCTCAGTAGGGTTATATGTTGACTGCGGTTCCCTCTATGAGTCGCCATTGTCAAGCGGGGCATCGCACCTGCTAGAGAAAATGGCTTTCAAGAGCACGACAAACCGAAGCCACTTTCGTGTTGTAAGGGAAGTGGAAGCAGTGGGTGGTAATGTAGGAGCCTCAGCCTCTCGGGAGCAAATGGGCTACACTTTTGATGCTCTGAGAACCTATGTCCCACAAATGATTGAATTGCTGGTTGACTCTGTAAGGAATCCGGCCTTCTTGGATTGGGAGGTCAACGAAGAGATTCGAAAGGTTAAAGAAGAGATAGGAGAGCAAGCAAACAATCCACAGCGCCTCCTTATGGAGGCAGTTCACTCTGCTGGTTATTCTGGAGCATTGGCTATGCCACTTTTGGCTACTGAATCAGCACTGAACAGATTAAATGCCCCCATTTTAGAGGAATTTGTTGCTGAGAATTATACTGCACCTAGAATGGTACTTGCAGCATCTGGGGTTGAGCATGAAGAACTTCTATCCGTTGCTGAACCACTTCTCTCTGATCTACCAAGTGTTCCGCGTTCTGAAGAACCAAGTTCTACATATGTTGGGGGTGATTTTCGTCGACAAGGTGAATCAGGGGTTGCACATGTGGCTATTGCCTTTGAAGTGCCTGGTGGCTGGAAAAAAGAGAAAGAAGCTATTATTTTGACCGTTCTACAGATGCTTATGGGAGGAGGTGGGTCATTCTCAGCTGGGGGACCTGGAAAGGGAATGCACTCAAGGCTTTATCTTCGTGTCTTGAATGAATACCAACAGATTCAATGTTTTTCTGCATTCAACAGTCTCTTCAACAATACAGGGTTATTTGGCTTATATGCAACCACAAGTTCTGATTTTGTGGAAAAAGCTGTGGACCTAGCAGTCAGAGAATTAATAGCACTCGCATCACAAGGACAAGTTTCACAGATACAGCTTGACCGTGCCAAGGAATCCACGAAGTCTGCAGTACTAATGAATTTAGAGTCCAGAATGATTGCATCAGAGGATATAGGAAGGCAGATATTGACTTACGGAGAAAGGAAGCCACTGGAGCAGTTCTTAAAGGAAGTAGATGCAATCACTTTGAATGACATCTCCAAATTTTCTCAGAAGATTATTTCCTCGCCTCTCACTATGGCATCCTATGGGGATGTTATGAATGTCCCAAGTTACGAATCCGTTAGCAGCAAGTTCCATGCAAAATGA 1488 0.455 MYRAASSRLTLLKGNGRTVGDSRFASRGLFSWITGESSSSLPPLDTPFRGFPPPSSLPDYVEPGKTKITTLSNGLKIASETSPNPAASVGLYVDCGSLYESPLSSGASHLLEKMAFKSTTNRSHFRVVREVEAVGGNVGASASREQMGYTFDALRTYVPQMIELLVDSVRNPAFLDWEVNEEIRKVKEEIGEQANNPQRLLMEAVHSAGYSGALAMPLLATESALNRLNAPILEEFVAENYTAPRMVLAASGVEHEELLSVAEPLLSDLPSVPRSEEPSSTYVGGDFRRQGESGVAHVAIAFEVPGGWKKEKEAIILTVLQMLMGGGGSFSAGGPGKGMHSRLYLRVLNEYQQIQCFSAFNSLFNNTGLFGLYATTSSDFVEKAVDLAVRELIALASQGQVSQIQLDRAKESTKSAVLMNLESRMIASEDIGRQILTYGERKPLEQFLKEVDAITLNDISKFSQKIISSPLTMASYGDVMNVPSYESVSSKFHAK* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2488 495 SUPERFAMILY LuxS/MPP-like metallohydrolase 287 486 IPR011249 GO:0046872
Vra5g2488 495 PANTHER MITOCHONDRIAL-PROCESSING PEPTIDASE SUBUNIT ALPHA-LIKE 25 494 IPR037715 GO:0006627
Vra5g2488 495 Pfam Insulinase (Peptidase family M16) 77 221 IPR011765 -
Vra5g2488 495 Pfam Peptidase M16 inactive domain 229 411 IPR007863 -
Vra5g2488 495 ProSitePatterns Insulinase family, zinc-binding region signature. 96 119 IPR001431 GO:0004222|GO:0006508
Vra5g2488 495 Gene3D - 280 492 - -
Vra5g2488 495 SUPERFAMILY LuxS/MPP-like metallohydrolase 64 273 IPR011249 GO:0046872
Vra5g2488 495 Gene3D - 58 268 - -
Vra5g2488 495 PANTHER METALLOPROTEASE 25 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2488 Vra-Chr5 31846282 31850867 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2488 K01412 - gmx:100810996 828.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2488 5 31846282 31850867 Vra5g2488 5 31846282 31850867 ECH
Vra5g2488 5 31846282 31850867 Vra9g0201 9 1408142 1413450 PCT