Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0181 ATGCTGTCTCCGTTTTCGCCCATGCCGGAAATCCCCGTCGATTTCCGAGCACCGCCGCCCTCTCCGGTGGCATCCGGCCGGAGATCCACCGTCACCAACGACGACGTTTTGACCGAGTTTCTAGAGGCCTCGCTCCGCGTCCCCGATCTGGTCCTGCCGGACAAGATCTTCCCCAAACAGAAGCACCTCGACGCGCCTCCTGAGGTAGACTTCGTGTCGCTCTGCTTCCACCGTGACGACGCTCTCCGCGACGTCGTGTCCGATTCCCTTGCCAGGATCGGGTGCTTCCAGCTGCTAAACCACGGGATTCCGTCACAGCTTGTGGACTCCGCCGCCGAGGACGCCGCCGGAGTGTTCCGGGTGCCGCATGCAAAGCGTGCAGCAGCGACTAGGTCACCGGAGAAGCCCTGGGGGTTCGAAGAGTATCACGCCGGAGAGGAGGAAGAAGAAGGTAGTGAAGAATTTGTGTGGTGCAATGAGGATGAGTTGAAGTCGAAAATGGAGGGAATTTGGCCCATTGGATATCCAAATTTCAGTGAAAAGATGGAAAAACTTATGTCACGGATAGAAATGGTGGCTATGAAAATGATGCATGTGATACTGAAAAAGAAGAGTGCAGAATTTGAGAGTGAGAACAATAAAGGGAATGTTTGTTGCATTTATAAGCATGGTGGTGATAATACTAAGGATGCATTGGCTAATTCTTTGAAATATGATGTGATCAGAATGCTGATCAGGGGAACAGATTACTCTCATTCATTGTGCTTCCATCTATGCAATGGCTCTTCACAGTTTCATGTTTACTCCAAGAAAAGTTGGCTCTCTTTCTGCCCTGAGCCAGGTGCCCTTATAGTCACTGCTGGAGATCAAATTCAGATGTTGAGTGGTGGACTTTACAAAAGTGTGATTGGAAGACCAATCTTTAAAACAGAGAAAAAACAGAGCATTTCAATGGCTTTCCTCTGTTCTCATCAAAAGAAGAAGAAGAATTTTGGAAGCCATGGGAGTAGAAGTGTTTCACTTTCCCAGCAAGCCATATTGGCTTTAATTCTGCCTCTTGTGTACCATGTCATGATTTTTGTTTACAAAAAACTTAATTCATGA 1104 0.4819 MLSPFSPMPEIPVDFRAPPPSPVASGRRSTVTNDDVLTEFLEASLRVPDLVLPDKIFPKQKHLDAPPEVDFVSLCFHRDDALRDVVSDSLARIGCFQLLNHGIPSQLVDSAAEDAAGVFRVPHAKRAAATRSPEKPWGFEEYHAGEEEEEGSEEFVWCNEDELKSKMEGIWPIGYPNFSEKMEKLMSRIEMVAMKMMHVILKKKSAEFESENNKGNVCCIYKHGGDNTKDALANSLKYDVIRMLIRGTDYSHSLCFHLCNGSSQFHVYSKKSWLSFCPEPGALIVTAGDQIQMLSGGLYKSVIGRPIFKTEKKQSISMAFLCSHQKKKKNFGSHGSRSVSLSQQAILALILPLVYHVMIFVYKKLNS* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0181 367 MobiDBLite consensus disorder prediction 1 30 - -
Vra9g0181 367 SUPERFAMILY Clavaminate synthase-like 57 327 - -
Vra9g0181 367 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 9 365 - -
Vra9g0181 367 Gene3D - 46 336 IPR027443 -
Vra9g0181 367 PANTHER - 9 365 - -
Vra9g0181 367 Pfam 2OG-Fe(II) oxygenase superfamily 248 322 IPR044861 -
Vra9g0181 367 Pfam non-haem dioxygenase in morphine synthesis N-terminal 78 153 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0181 Vra-Chr9 1255102 1257256 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0181 - - gmx:100786234 555.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0181 9 1255102 1257256 Vra9g0181 9 1255102 1257256 ECH
Vra5g2476 5 31715526 31717380 Vra9g0181 9 1255102 1257256 PCT