Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0177 ATGGCACCCCATGGAGAGTCTCTGGTTAGCTCTTTCTCTAGGAAAAGCAACATGTCAAAACCACCAAAGCTTGCATCAGATAACCTTCAACGAACGGTCTCGGACATCTCTTTTGAGCTGAGCAAAGAAGAGATGGATGAGTTGAAGCTGCCGGCAATATCTGAGGTTGAGAATGCCAAGTGTGAGTGCTGTGGGATGTGTGAGGAGTGCACACCGGAGTACATCGACCGTGTGCGTGAGAAGTTCAACGGGAAGTGGGTGTGTGGGTTGTGTTCTGAGGCAGTGAAAGAAGAGTTGGAGAAAAATGGCGGAGAAAAGGAAGAAGCTTTGAGTGCACACATGAGTGCATGTGTTAGGTTCAACAAATATGGTAGGGCTTTCCCTGTTCTGTTCCAAGCACAGGCCATGAAAGAGATGCTCAAAAAGAACACCATAGATGGTAGAAGGGCCAAGTCCATTAGCCCTAGGGACAAAGGAGGCCCTAAGAAAGGAGGAATTGCTCGTAGTTCTAGTTGCATTCCAGCACTTACAAGAGAGATCAATGATATCAAAATAGCCAATTAA 564 0.4663 MAPHGESLVSSFSRKSNMSKPPKLASDNLQRTVSDISFELSKEEMDELKLPAISEVENAKCECCGMCEECTPEYIDRVREKFNGKWVCGLCSEAVKEELEKNGGEKEEALSAHMSACVRFNKYGRAFPVLFQAQAMKEMLKKNTIDGRRAKSISPRDKGGPKKGGIARSSSCIPALTREINDIKIAN* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0177 187 MobiDBLite consensus disorder prediction 146 163 - -
Vra9g0177 187 PANTHER OS01G0745000 PROTEIN 1 184 IPR012876 -
Vra9g0177 187 MobiDBLite consensus disorder prediction 9 28 - -
Vra9g0177 187 MobiDBLite consensus disorder prediction 1 28 - -
Vra9g0177 187 MobiDBLite consensus disorder prediction 146 170 - -
Vra9g0177 187 Pfam Protein of unknown function (DUF1677) 56 142 IPR012876 -
Vra9g0177 187 PANTHER CASP-LIKE PROTEIN (DUF1677) 1 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0177 Vra-Chr9 1214433 1215724 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0177 - - gmx:100816162 343.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0177 9 1214433 1215724 Vra9g0177 9 1214433 1215724 ECH
Vra5g2474 5 31697609 31698761 Vra9g0177 9 1214433 1215724 PCT