Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2474 ATGGCACCGAATGGAGAGTGTTTGCCTAGTTCATTCTCTAGAAACAGCAGCATGTGCAAACCTCCGAGGCTTTCATCTGATCACATTCAAAGAACGATCTCAGACATCTCTTTTGAGCTAACGAAGGAAGGGATTGATCTGTCACTGGCACCTATAACTGAGGTTATGGATGCCAAGTGTGAGTGCTGTGGAATGTGCGAGGAGTTCACTCCTGAGTACATAGAGCGTGTGCGTGAGAAGTTCTTGGGGAAGTGGGTGTGTGGTTTGTGTAGTGAGGCAGTGAAGGAAGAGCTTGAGAAAAATGGTGGGAAGAAGGAAGAGGCATTGAGTTCACACATGAGTGCATGTGTGAGGTTCAACAAATATGGAAGGGCTTTCCCAGTTCTTTTCCAAGCTGAGGCCATGAAAGAGATGCTGAAAAAGAACAAAATGGAAGGAAGAAGAAGGACTAAGTCCTTCAACCCAAGGGAGAAAGGAGGACAAAACAAAGGAGGCATTGCTAGAAGTTCAAGCTGCATTCCAGCAATCACAAGAGAGATCAATAGTCTTCCAATGTGTTAA 561 0.4528 MAPNGECLPSSFSRNSSMCKPPRLSSDHIQRTISDISFELTKEGIDLSLAPITEVMDAKCECCGMCEEFTPEYIERVREKFLGKWVCGLCSEAVKEELEKNGGKKEEALSSHMSACVRFNKYGRAFPVLFQAEAMKEMLKKNKMEGRRRTKSFNPREKGGQNKGGIARSSSCIPAITREINSLPMC* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2474 186 MobiDBLite consensus disorder prediction 143 168 - -
Vra5g2474 186 MobiDBLite consensus disorder prediction 1 24 - -
Vra5g2474 186 MobiDBLite consensus disorder prediction 8 24 - -
Vra5g2474 186 PANTHER CASP-LIKE PROTEIN (DUF1677) 1 184 - -
Vra5g2474 186 PANTHER OS01G0745000 PROTEIN 1 184 IPR012876 -
Vra5g2474 186 Pfam Protein of unknown function (DUF1677) 55 141 IPR012876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2474 Vra-Chr5 31697609 31698761 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2474 - - gmx:100785884 317.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2474 5 31697609 31698761 Vra5g2474 5 31697609 31698761 ECH
Vra5g2474 5 31697609 31698761 Vra9g0177 9 1214433 1215724 PCT