Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0130 ATGGCTACCGTGGTTGAAGAAAACAATGTTGAGTATGATTGTGATCCCGAAGATGCAAAGAGACTGTTAACAATGCGGAGGCGCGAAGCCAGCGATGACGAAGAAGCCGAAGGGGAAGAGGTCACTGATAAGAGGGAAGTTGGTAGAGTAGAGGTTCGTTCTGATAACTTAGATGATGAAGGAGGTGTTGAAGATTATGCTAATGATGGTGATGATGTTGAAGAAGGAGAAGAAGAATTGCAAGAAGATGAATTGCAAGAAGAAGGAGAAGAAGAGGAGGAGGAGGTTGAAGAAGTGTACGAGGAGAAGGGTGCAAGTGTGGGGGTTGAGGTTGAGGGTCCAGTGATTGTGGCTAAGGAATCTGATGATGATGTCAGACCCCCTTTGGAAGATTCTGCCGAGGATCATTCCGAGGAGAAAAAGGAGTCTGATCCATTCGCGGTTCCCACAGCCGGAGCTTTTTACATGCACGACGACCGATTTGGGGACAATGCTGGTACCCGCAACAGACGGATACATGGTGGAGGAAGGAGACTGTGGGAATCCAAAGATGACAAGAAATGGGGTCATGATAAATTTGAGCAAATTTTGCATGAAAAGCATTATGAGGAGAGGAGACCTTCTAAGGGTAATTATCATGTCCGTGGTAATGGTCGAGGCACTGATTATAGAGGGTACGTACGAGGAAGTAAGAAAGGATATAATAGCAGTAGCAATCAAAATCAGATGCCTAAGAGTGTTGTGAGAGGGAGAGGCCCCCAAAAGTATGAACGTAGCAACAAAATCAATGGTCCATCTGCCCAAGTGCAAAATAAACAATCTGGGAAATCTCGTGAGAAAAATTCAAATGTTAGTTTGGAGAGGACTTCAACACCTTCTTCCCATGCAGAATCTGACCCTGTGCCTTCTAAAAATCAAGTGCTGGCTTCAAATTTGAATTCAGCTTCCCCACCATATTACCCCTCAGGCTCTTCCAGCAATGATATTAATTTGGCACAAAAAAGGGAGGTGCAAACTGGTGGCGGTAGCAGGAATGTTGGTCATGTTGCTGTGGGTGAGGGTTTTCCAGTTCAACAAAAGAATGCTCTGATTCAGGGAAAGAATGTTGTTGATTCCGTCAGCATGTCAAAGTTGTATATAAATGAATCCACCCCTCGATCTGTTGGAAAGCCTTTGAACAATGTGCGTATGGCACGATCTGGTTCTGCTGTAGTCAATGCTTCTCAATCTCCTCACCCAAGGACTTCTGGGAGTGGGAGGGGAGTATCAATCCCAGTACAGACAAATTTTCAGCGTTCTCCCTCACATAATAAAGTTTCTCCATCAGAATTCCAGGCTATTCAGACAAGTTCTACTCCAGGTAGGAATTCAACTTCTGTGGAAGCTACTGCCCCACGGTTGGGCCAAAGACCTGGCAGTGGGTCTCCATTGTCATTACCCTCCAAAACAGCCACGCCAATTAATTCACATGATTCTGGAGAATTGGATTCAGGGTCAGAATCTGGTAAAGGCAAAGGGGCTTTGGTTGGGAAGGGGAGGGGGGGTTCCCATGGCGCAGGACAGGGAGCTTTTGTTTATGGTGGGGCACAAGTAATAGGCACCGCTGGAAATGTGGGTGTTAGCCATGGAGATCCAAACTTCCCTGCTTTCTTGCCAGTCATGCAATTTGGGGGCCAGCATCCTGGGGGTATAGGAGTTCCTGCTGTTGGCATGGCATTCCCTGGATATGTTGCTCAGCCTCAACTGGGAAAATCAGAAATGACATGGCTACCAGTCTTGGCTGGTACTGCAGGAGCTTTAGGGGCTACATACCCATACCTTGCTGTTGATGGTGCAAGCAGTCACCAATCTGGACAGGCCTCTGCAATGGGTACCTCAAGCAAGGACCATAGTGTTAACAAAGCTAATAATGAATTGAAGCCACCTCAGAAATCTGAGCTTGCAAGTGAAGAGTTTGGACAGAGGCAGAATAAACCCCGAAGATACTCAGAGATGAATTTTGGTCAGTGA 2010 0.4647 MATVVEENNVEYDCDPEDAKRLLTMRRREASDDEEAEGEEVTDKREVGRVEVRSDNLDDEGGVEDYANDGDDVEEGEEELQEDELQEEGEEEEEEVEEVYEEKGASVGVEVEGPVIVAKESDDDVRPPLEDSAEDHSEEKKESDPFAVPTAGAFYMHDDRFGDNAGTRNRRIHGGGRRLWESKDDKKWGHDKFEQILHEKHYEERRPSKGNYHVRGNGRGTDYRGYVRGSKKGYNSSSNQNQMPKSVVRGRGPQKYERSNKINGPSAQVQNKQSGKSREKNSNVSLERTSTPSSHAESDPVPSKNQVLASNLNSASPPYYPSGSSSNDINLAQKREVQTGGGSRNVGHVAVGEGFPVQQKNALIQGKNVVDSVSMSKLYINESTPRSVGKPLNNVRMARSGSAVVNASQSPHPRTSGSGRGVSIPVQTNFQRSPSHNKVSPSEFQAIQTSSTPGRNSTSVEATAPRLGQRPGSGSPLSLPSKTATPINSHDSGELDSGSESGKGKGALVGKGRGGSHGAGQGAFVYGGAQVIGTAGNVGVSHGDPNFPAFLPVMQFGGQHPGGIGVPAVGMAFPGYVAQPQLGKSEMTWLPVLAGTAGALGATYPYLAVDGASSHQSGQASAMGTSSKDHSVNKANNELKPPQKSELASEEFGQRQNKPRRYSEMNFGQ* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0130 669 MobiDBLite consensus disorder prediction 61 100 - -
Vra9g0130 669 MobiDBLite consensus disorder prediction 400 464 - -
Vra9g0130 669 MobiDBLite consensus disorder prediction 41 60 - -
Vra9g0130 669 MobiDBLite consensus disorder prediction 615 643 - -
Vra9g0130 669 MobiDBLite consensus disorder prediction 259 340 - -
Vra9g0130 669 MobiDBLite consensus disorder prediction 174 211 - -
Vra9g0130 669 MobiDBLite consensus disorder prediction 474 495 - -
Vra9g0130 669 MobiDBLite consensus disorder prediction 24 345 - -
Vra9g0130 669 MobiDBLite consensus disorder prediction 400 514 - -
Vra9g0130 669 SMART Btz_2 118 220 IPR018545 GO:0003729|GO:0006397|GO:0035145
Vra9g0130 669 PANTHER PROTEIN MLN51 HOMOLOG 1 669 - -
Vra9g0130 669 MobiDBLite consensus disorder prediction 116 145 - -
Vra9g0130 669 MobiDBLite consensus disorder prediction 231 247 - -
Vra9g0130 669 Pfam CASC3/Barentsz eIF4AIII binding 131 216 IPR018545 GO:0003729|GO:0006397|GO:0035145
Vra9g0130 669 Coils Coil 73 102 - -
Vra9g0130 669 MobiDBLite consensus disorder prediction 615 669 - -
Vra9g0130 669 PANTHER PROTEIN MLN51 HOMOLOG 1 669 IPR044796 GO:0003729|GO:0006397|GO:0035145
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0130 Vra-Chr9 857378 862172 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0130 - - gmx:100792594 835.099
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0130 9 857378 862172 Vra9g0130 9 857378 862172 ECH
Vra5g2423 5 31346530 31350999 Vra9g0130 9 857378 862172 PCT