Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2423 ATGGCTACGGCAGGTGAAGAAGGGCTTGACTACGAGAGTGATCCCGAAGAGGCCACGAGATCGCTCGCAATGCGGAGAAGGCGCGAGGCCAGTGATGATGAGGAAGGCGACGCTGACACCGACGCGAGAAACACCGCAGTCGATCGCCGGATAACCCATTCCGATGATTCCGACGGTGAGGGTGGCGTGGCAGATTATGACGACGAAGAAGAATTGGAAGAAGAGGAAGAAGAAGAGGAGGAGGAAGAAGAGTTGTTGGAAGAGGAAGAGGATGAGGGTAAGGTTGGAGAGGAAAGAGGTTTGAATGGAACAGTAGTTAAGGACTCCGATGCTGATGTTAAAGGCCCTTTGGAGGAATCTGGGAATGGAGATGATGAAGAGAAGAAGGAGAATGAACCGTTTGCGGTGCCCACTGCTGGAGCATTTTATATGCACGATGATCGCTTCAGGGATAATGCCGGTGCACGCCACAGGCGCATGCGTGGTGGAAGGAGACTCTGGGAGTCCAAGGATGACAGGAAATGGGGACATGATAAGTTTGAGGAAATTTCTCTGCAAGAAAGGCAATACAAAGAGGGAAGGAGACCTTCTAAGGGTAGTTATCGAGGTCGTGGAGGTAAAACACGAGGTGTTGATCGCAGTGGAGGATATGTCCGAGGTAACAGAAAAGGGTATGATAACAGAGGCAATCAAACACAGGCACCCAAGAGTGTTGTGCGAGGGAGAGGACCCCGTAGGTACGAGCCTACTAATAAGAGCAATGATTCAGCATCTCATGTGCAAAATAAACAATACGGGAAACAGCCTGAGAAAGTTTCGCATGGTGGTTCAGGGAAAACTTTCACCCCTGTCTCTAATTCAGAACCCGATCCTGTACCTTCTAAGAAACAGGTCTTTGCATCAAATTTGAATTATGCTTCTCCCCCTTTTTACCCTTCGAGTTCTTCCAACAAAGATACAAGTGTGACATCAAAAGGGGATATCCCAATTGCTGCTTCGAGTAGGAACGCTCGGCCTGGTGTTGTCGATGAGGGATTTTTGGTTCAACAGAACAACGTACTTCTCCGGGGAAAGAATGTTGTCGATCATGTCAGCATGGAGAAGTTGTATATTGATGGGCCTGGCGCCCCATCTGTTGGGAAAGCTTTTAACAATTTGCATATGCCGCCACCTGGATCTTCTGGAGTTAATGCATCTCAATCTACTCATCCAAGAGGTACTGGAAGGGGTGGAGCAGTGCCAGTGCAGATGAATTATCAGCCTGCTGCTTCTCATAATCAAGCTGGTAAAATTGATCCAACTCAACTCCAGGCTATTCAGAGAACTGCTCCTGGGCGAACTTCTCCGTCTGTGCAAGCCCCTGCTCCACAGTTGGGTCATCGACCTGGTACTGGGTCTCAGGCTTCATCTCCCCCAATCACAACCGCTGCAATTGGTTCATTGGATTCTGGAGAAATTGAGGCAGCTTCGGAATCAGGTAAATTGAAGGGTGCGTTGGTTGGGAAGGGAAGGGAGGCTTCCCAGGGTAGCGGAAGGGGTTCTTTTGTTTATGGTGGAACTATGGGTACTGCTGGAAATATCAATGGTAATCATGGAGATCAGAACTTTCCAACCTTTTTGCCAGTTATGCAATTTGGTGGGCAGCATCCTGGTGGCTTAGGAGTTCCTGCGGTTGGCATGGCATTCCCTGGATATGTTGCTCAGCCTCAACTTGGTTTGGGAAACTCTGAAATGACATGGCTACCGGTTTTGACTGGAGCAGCAGGAGCTTTAGGGGCTGCTGGAGCTTTAGGGGCGGCAGGTGCTTTAGGGGCCACATACTGTCCACCCTATCTCACTGTTGATGGTGCTTATCATGCACGACAATCAGGGCAGACATCCGCAACAGCTACTTCAAGCAAGGAAAATAATGTGAATAAAGGTAGCAATGAATGGAAGGCACCACCAAAGTCTGAGACTGTAAATGATGAGTTTGGACAGCGGCATAATAAACCCCGCAGATACTCGGAGATGAACTTTGGGCAGTGA 2028 0.4906 MATAGEEGLDYESDPEEATRSLAMRRRREASDDEEGDADTDARNTAVDRRITHSDDSDGEGGVADYDDEEELEEEEEEEEEEEELLEEEEDEGKVGEERGLNGTVVKDSDADVKGPLEESGNGDDEEKKENEPFAVPTAGAFYMHDDRFRDNAGARHRRMRGGRRLWESKDDRKWGHDKFEEISLQERQYKEGRRPSKGSYRGRGGKTRGVDRSGGYVRGNRKGYDNRGNQTQAPKSVVRGRGPRRYEPTNKSNDSASHVQNKQYGKQPEKVSHGGSGKTFTPVSNSEPDPVPSKKQVFASNLNYASPPFYPSSSSNKDTSVTSKGDIPIAASSRNARPGVVDEGFLVQQNNVLLRGKNVVDHVSMEKLYIDGPGAPSVGKAFNNLHMPPPGSSGVNASQSTHPRGTGRGGAVPVQMNYQPAASHNQAGKIDPTQLQAIQRTAPGRTSPSVQAPAPQLGHRPGTGSQASSPPITTAAIGSLDSGEIEAASESGKLKGALVGKGREASQGSGRGSFVYGGTMGTAGNINGNHGDQNFPTFLPVMQFGGQHPGGLGVPAVGMAFPGYVAQPQLGLGNSEMTWLPVLTGAAGALGAAGALGAAGALGATYCPPYLTVDGAYHARQSGQTSATATSSKENNVNKGSNEWKAPPKSETVNDEFGQRHNKPRRYSEMNFGQ* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2423 675 MobiDBLite consensus disorder prediction 390 406 - -
Vra5g2423 675 Coils Coil 63 92 - -
Vra5g2423 675 MobiDBLite consensus disorder prediction 625 649 - -
Vra5g2423 675 SMART Btz_2 94 205 IPR018545 GO:0003729|GO:0006397|GO:0035145
Vra5g2423 675 MobiDBLite consensus disorder prediction 95 133 - -
Vra5g2423 675 PANTHER PROTEIN MLN51 HOMOLOG 1 593 - -
Vra5g2423 675 PANTHER PROTEIN MLN51 HOMOLOG 598 675 - -
Vra5g2423 675 MobiDBLite consensus disorder prediction 381 415 - -
Vra5g2423 675 MobiDBLite consensus disorder prediction 250 268 - -
Vra5g2423 675 MobiDBLite consensus disorder prediction 462 477 - -
Vra5g2423 675 Pfam CASC3/Barentsz eIF4AIII binding 118 206 IPR018545 GO:0003729|GO:0006397|GO:0035145
Vra5g2423 675 MobiDBLite consensus disorder prediction 278 295 - -
Vra5g2423 675 MobiDBLite consensus disorder prediction 625 675 - -
Vra5g2423 675 MobiDBLite consensus disorder prediction 61 94 - -
Vra5g2423 675 MobiDBLite consensus disorder prediction 14 33 - -
Vra5g2423 675 MobiDBLite consensus disorder prediction 164 209 - -
Vra5g2423 675 MobiDBLite consensus disorder prediction 1 295 - -
Vra5g2423 675 MobiDBLite consensus disorder prediction 40 60 - -
Vra5g2423 675 PANTHER PROTEIN MLN51 HOMOLOG 1 593 IPR044796 GO:0003729|GO:0006397|GO:0035145
Vra5g2423 675 PANTHER PROTEIN MLN51 HOMOLOG 598 675 IPR044796 GO:0003729|GO:0006397|GO:0035145
Vra5g2423 675 MobiDBLite consensus disorder prediction 442 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2423 Vra-Chr5 31346530 31350999 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2423 - - pvu:PHAVU_005G172200g 1175.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2423 5 31346530 31350999 Vra9g0130 9 857378 862172 PCT