Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0129 ATGGAGGACTGCAACAACAGCAAAGGAGAAGTTCATGCAAATTTTACACAGCAGAAGAACTCTTCAGCAAGATCAGGTATCTGTTTGAAATCTTCGTCATCTGGAAGGTCAACTCCACAAAATTCTCCTTCATTTCAGCGACCACATTCTACCTTAACACCAAGAAGAGAAGGCAAGGGTGTTGCACAGTGCTACGGCAGCAACCGGATACTGTTATGGCTGCTTCTGATAACCCTTTGGGCTTATCTTGGATTTTTTGTACAGTCTAGGTGGGCACATGATGAAAAGGAGGATGAATTTTCAGGCTTTAAAAGCAGACAAAGTGTTGCAACAAACTCCTATGTTGAACAGAATCAGCATCATGATTTGATTGCCAGAAACATTTCCTTATCTGTTAACATCGAACAAGGTATGAACAAACCAATAGATGTGGCTTTGGCCAAGAAAGAATATGGTGTTCTACCTGAGGTTAAAGCTAGCACAAGGAAAAGAAGAAGGCGACCAATGCATGTTTTGAGAGGTAAGAGGAGGCGAAAACATAAACTTGAGAGTGGTGGTTTGGAGGAGCTGGAGCCAGAGATTCCCCCAAGGAATTCCACCTCTGGATTCCTTGTTGGTCCATTTGGTTCGTTAGAGGATAGAATTCTGCAGTGGAGTCCTCAGGGGCGTTATGAAACCTGTAACACGAAAGGGGACTTTGAGCGCCTTGTTTGGTCAAGAAGCTTTGTTCTGATATTTCATGAGCTTTCCATGACTGGAGCTCCACTTTCAATGATGGAGTTGGCAACTGAACTCTTGAGTTGTGGGGCTTCTGTTCATGCTGTGGTGCTTAGCAGGAAGGGTGGTTTGATGCAAGAACTTGCTAGAAGACAAATCAAGGTGCTTGATGACAAAGCATATCACAGCTTCAAAACTGCAGCCAAGGCAGATCTTGTCATTGCTGGATCAGCTGTCTGTGCATCATGGATTGAACAATACATTGAACATTTTCCCGTTGGAGCAAGTAAAGTTGCTTGGTGGATTATGGAAAACAGACGAGAGTATTTTGATCGTGCAAAGGATATGTTGCAGAGAGTGAAAATATTGATTTTTCTCTCTGAAGCACAATCTAAGCAATGGCAAAAGTGGTGTGAAGAAGAAAGCATAAAATTGAGATTACAGCCAGCACTTGTTCCATTGTCTGTCAATGATGAACTAGCTTTTGTAGCAGGCATTCCCTCTACACACAATACTGCATCCTTCAGTGCTGCAATAATGGATGAGAGAAGAAAGTTGTTGAGAGATTCAGTTCGAAGAGAAATGGGATTGAGTGATAATGATATGCTTGTTATGACTCTGAGTAGCATCAACCGTGGGAAGGGTCAGCTATTTCTTCTTGAATCAGCAAGAACAATTGTAGAAGATGAACCATTGCACCATGATAATAAGAAAATGCCAGTGTCATCTGATGATGGACAACACCATGATAATAGTAGTGTAGTAGCCTTCAACAATATCTCAAGCACATTCATAAAAAGCAAGCAAGTAGTTTCCAACAACAATGCAACAACGGCACAATCTCTCAAAATTCTCATTGGTTCTGTGGGATCTAAGAGCAACAAAGTGGATTATGTTAAGGGTCTGCTAAGATTTTTAGCACACCATTCAAACTTGTCAAAGTCAGTTCTGTGGACCTCAGCCACCACACGTGTTGCATCACTTTACTCTGCTGCAGATGTTTATGTCATAAACTCTCAGGGATTGGGAGAAACATTTGGAAGGGTGACTATAGAAGCAATGGCATTTGGTCTTCCGGTGCTTGGAACAGATGCTGGAGGAACGCAAGAAATTGTTGAACATAATGTGACAGGTCTCCTTCATCCTATTGGTCGCACAGGGAACCATGTTCTTGCAGAGCATCTCCGGTTTTTACTTGAAAACAGCTTTGTAAGAGAGAAAATGGGGATAGAAGGAAGAAAAAAGATGCAGAGGATGTTCTTGAAACAGAACATGTATGAGAAATTTGCAGAGATTCTTGACATGTGCATCACACCCAAATAA 2040 0.4186 MEDCNNSKGEVHANFTQQKNSSARSGICLKSSSSGRSTPQNSPSFQRPHSTLTPRREGKGVAQCYGSNRILLWLLLITLWAYLGFFVQSRWAHDEKEDEFSGFKSRQSVATNSYVEQNQHHDLIARNISLSVNIEQGMNKPIDVALAKKEYGVLPEVKASTRKRRRRPMHVLRGKRRRKHKLESGGLEELEPEIPPRNSTSGFLVGPFGSLEDRILQWSPQGRYETCNTKGDFERLVWSRSFVLIFHELSMTGAPLSMMELATELLSCGASVHAVVLSRKGGLMQELARRQIKVLDDKAYHSFKTAAKADLVIAGSAVCASWIEQYIEHFPVGASKVAWWIMENRREYFDRAKDMLQRVKILIFLSEAQSKQWQKWCEEESIKLRLQPALVPLSVNDELAFVAGIPSTHNTASFSAAIMDERRKLLRDSVRREMGLSDNDMLVMTLSSINRGKGQLFLLESARTIVEDEPLHHDNKKMPVSSDDGQHHDNSSVVAFNNISSTFIKSKQVVSNNNATTAQSLKILIGSVGSKSNKVDYVKGLLRFLAHHSNLSKSVLWTSATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGLPVLGTDAGGTQEIVEHNVTGLLHPIGRTGNHVLAEHLRFLLENSFVREKMGIEGRKKMQRMFLKQNMYEKFAEILDMCITPK* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0129 679 Pfam Glycosyl-transferase family 4 238 407 IPR041693 -
Vra9g0129 679 MobiDBLite consensus disorder prediction 1 58 - -
Vra9g0129 679 Pfam Glycosyl transferases group 1 542 653 IPR001296 GO:0016757
Vra9g0129 679 CDD GT4_PimA-like 244 672 - -
Vra9g0129 679 MobiDBLite consensus disorder prediction 9 51 - -
Vra9g0129 679 MobiDBLite consensus disorder prediction 171 193 - -
Vra9g0129 679 PANTHER BNAA05G14870D PROTEIN 1 678 - -
Vra9g0129 679 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 248 672 - -
Vra9g0129 679 Gene3D Glycogen Phosphorylase B; 417 659 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0129 Vra-Chr9 852988 857015 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0129 29 678 Glycosyltransferase AT3G15940 57.060 0.0 721
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0129 - - vra:106773827 1180.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0129 9 852988 857015 Vra9g0129 9 852988 857015 ECH
Vra5g2422 5 31338953 31343274 Vra9g0129 9 852988 857015 PCT