Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2422 ATGGAGGAAAGCAGCAATAGAGGGGAATTTCAGCCTAATTTGGCTAAGCAGACTTCATTGAGGTTAGGTGGCAGTTTTAAATCAACGTTATCTGGAAGATCAAGTCCGCGAAATTCGCCGTCATTTCGGAGACTGAATTCTGGCCGCACACCAAGAAGAGAAGGAAGGAACAGTGTAGGCGGGGCACTGTGGTTTCGGAGCAATCGTTTACTTTTTTGGTTGCTTCTAATTACCCTCTGGGCTTATCTTGGATTTTTCGTTCAGTCATGGTGGGCTCATAGTGATAAGAAGGAGGAATTTTCTGGCTTTGGAACGGGGCCGCGAAATACTGGCTCTGACGCCGAACAGGTTCAGCGCCGTGATTTGCTTGCTAGTGATAATTCATTGTCTGCTAATAATGAGACTGATGCAAATATAGCAGGGACTAGTAAAACTATAAATGTAGCTTTGGCCAAGAAAGGCAATGATGTTTCCTTACATCGTAAAACGAGCTCAAAGAAGAGGAGCAGGAGAAGACGTGCTTTGAAAGGTAAATCAAGTGGTAAGCTGAAACCAACTACAGAAGTTAAGAACGCTGATATAGAGGAGCAGGAGCCAGAAATTCCTACGGCCAATAGTACGTATGGATTGCTTGTTGGTCCGTTTGGCTCAGTGGAGGATAGGATTCTGGAATGGAGTCCAGAGAAACGTTCTGGGACATGTAACAGGAAGGAGGACTTTGCACGTCTGGTTTGGTCCCGAAGATTTATCTTGATATTTCATGAGCTTTCCATGACTGGAGCTCCACTTTCAATGATGGAGTTGGGAACAGAACTTTTGAGCTGTGGGGCTACGGTTTCAGCTGTTGTGCTTAGCAAGAAAGGTGGTTTGATGTCAGAGCTTACTAGGAGACGGATCAAGGTGGTTGAGGACAAAGCTGATCTCAGCTTCAAAACTGCAATGAAGGCCGATCTTGTCATTGCTGGTTCAGCTGTCTGTGCATCATGGATTGAACAATATATCGAACATTTCCCTGCTGGTGCAAGCCAAGTTGCCTGGTGGATTATGGAAAATCGTCGAGAGTACTTTGATCGTTCCAAAGATGTATTGGGCAGAGTAAAGATGTTGGTTTTTCTTTCTGAATCACAATCTAAACAGTGGCAAAAGTGGTGTGAAGAGGAAAGGATAAAACTTAGATCCTACCCTGAAATTGTTCCATTGTCTGTCAATGATGAACTGGCGTTTGTAGCTGGTATTCCTTCAACACTTAACACTCCATCCTTTAGTACTGAGAAAATGGTGGAGAAAAAGCAGTTATTGCGAGAATCAGTCCGAAAAGAAATTGGCCTAACTGATAATGACATGCTTGTGATATCACTTAGTAGCATCAACCCTGGGAAGGGCCAGCTATTGCTTCTTGAATCAGTAAGCTCAGTACTTGAACAAGGATTGTTGCAAGATGATAAGAAAATGAAAAAGGTGTCAACTATGAAGGAAGGCATATCTACCCTGGCTAGAAAGCATCGCAATAGAAAATTGTTGCCGGTGATGAAGAATGGCAAAGTAGCTTCGAATGATATCTTAAGCAGGAGGAAACAAGTTTTGCCTAATGACAAAGGAACAATTCAACAATCTCTCAAGCTTCTTATTGGTTCTGTTGGATCAAAGAGTAACAAGGCGGATTATGTTAAAAGCCTTCTAAATTTCGTAGAACAGCATCCAAACACCTCAAAATCAATTTTTTGGACTCCGGCCACAACTAGGGTTGCCTCACTTTACTCTGCTGCTGATGTTTATGTTATAAACTCTCAGGGGCTGGGAGAAACATTTGGACGTGTGACTATAGAAGCAATGGCGTTTGGTCTTCCGGTTCTTGGAACGGAAGCTGGGGGAACACAGGAGATTGTTGAGCACAATGTTACAGGTCTTCTTCATCCTGTTGGACATCCAGGGAATCTTGTTCTCGCACAGAATCTCCGGTTTTTACTCAAAAACCAGTCTGCAAGGAAGGAAATGGGTGTGGAAGGAAGAAAGAAGGTGCAGCGAATGTATTTGAAGCAACACATGTATAAGAAATTTGTAGAGGTTATTGTTAGGTGCATGAGAAGCAAATAA 2094 0.4303 MEESSNRGEFQPNLAKQTSLRLGGSFKSTLSGRSSPRNSPSFRRLNSGRTPRREGRNSVGGALWFRSNRLLFWLLLITLWAYLGFFVQSWWAHSDKKEEFSGFGTGPRNTGSDAEQVQRRDLLASDNSLSANNETDANIAGTSKTINVALAKKGNDVSLHRKTSSKKRSRRRRALKGKSSGKLKPTTEVKNADIEEQEPEIPTANSTYGLLVGPFGSVEDRILEWSPEKRSGTCNRKEDFARLVWSRRFILIFHELSMTGAPLSMMELGTELLSCGATVSAVVLSKKGGLMSELTRRRIKVVEDKADLSFKTAMKADLVIAGSAVCASWIEQYIEHFPAGASQVAWWIMENRREYFDRSKDVLGRVKMLVFLSESQSKQWQKWCEEERIKLRSYPEIVPLSVNDELAFVAGIPSTLNTPSFSTEKMVEKKQLLRESVRKEIGLTDNDMLVISLSSINPGKGQLLLLESVSSVLEQGLLQDDKKMKKVSTMKEGISTLARKHRNRKLLPVMKNGKVASNDILSRRKQVLPNDKGTIQQSLKLLIGSVGSKSNKADYVKSLLNFVEQHPNTSKSIFWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGLPVLGTEAGGTQEIVEHNVTGLLHPVGHPGNLVLAQNLRFLLKNQSARKEMGVEGRKKVQRMYLKQHMYKKFVEVIVRCMRSK* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2422 697 MobiDBLite consensus disorder prediction 7 46 - -
Vra5g2422 697 Pfam Glycosyl-transferase family 4 245 414 IPR041693 -
Vra5g2422 697 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 259 690 - -
Vra5g2422 697 Pfam Glycosyl transferases group 1 547 671 IPR001296 GO:0016757
Vra5g2422 697 CDD GT4_PimA-like 250 690 - -
Vra5g2422 697 PANTHER BNAA05G14870D PROTEIN 1 697 - -
Vra5g2422 697 MobiDBLite consensus disorder prediction 156 188 - -
Vra5g2422 697 MobiDBLite consensus disorder prediction 1 58 - -
Vra5g2422 697 Gene3D Glycogen Phosphorylase B; 421 677 - -
Vra5g2422 697 MobiDBLite consensus disorder prediction 163 179 - -
Vra5g2422 697 PANTHER BNAA05G14870D PROTEIN 1 697 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2422 Vra-Chr5 31338953 31343274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g2422 24 695 Glycosyltransferase AT3G15940 62.190 0.0 823
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2422 - - gmx:100793827 1205.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2422 5 31338953 31343274 Vra9g0129 9 852988 857015 PCT