Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0128 ATGGAGTTGATTTCGGGTCTACCACAGGACGTAGCACGGGACTGTCTCATTCGGGTTTCGTACCAGCAGTTCCCCACGGTGGCGTCCGTGTGCAAGCTCTGGAAATCGGAGATTCTTTCGCCGGAGTACCACCGTCAACGGCGAAGCACGAAAAACGCGCAGAAGCTCATAGCGATGGTTCAGGCTCGAGACCAACCGGGAACTGGATCGATCAAACGAGTGACGAACCCGGTTTACCGTCTCAGCGTGTTCGAACCGGAAACGGGTCACTGGAACGAGCTGCTACCACCGCCCGAGTTTTATTCCGGGTTACCTATGTTCTGTCAGTTAGTTAGTGTCGGGTACGATCTTGTCTTGTTGGGCGGGTTGGACCCGAATTCGTGGAAAGCTTCGAATTCTGTGTTTGTGTACAATTTCTTGTCGGCGGAGTGGCGCCGCGCAGCGGACATGCCGGGTGGGCCCCGCACGTTTTTCGCTTGCGCGTCGGATTCTAAGGGGACGGTTTTCGTTGCCGGTGGACACGACAACGAGAAGAACGCGCTGCGTTCGGCGCTGGTCTATGAGGTTACCTCGGACCGGTGGGTTTCGCTTCCAGACATGGCGGCGGAGCGGGACGAGTGCAAGGGCGTTTTCCGTCGCGGGAAGTTCTTCGTCGTCGGGGGCTACCCGACGGAGAAGCAAGGAAGGTTCGAGAGGAGCGCGGAGGCGTTCGATCCTGCTACATGGCGGTGGGACGAAGTGAAAGAGGACTTCCTGGATTGCGCCACGTGTCCGAGGACGTTAGTGGACGGTGGTGATGACGAGGCGGTGTTTCTTTGCAGCGCCGGGGACTTGATCTCGCTTCGCGGCAACACGTGGCAGAAGATATCGACGGTGCCGGGGGAGATACGCAACGTAGCGTACATTGGGGCGTTGGATGGGACGCTGGTTTTGATCGGATCTAGCGGCTATGGTGAAGTCCACGTGGCTTTTGCTTTCGATCTTGAGAGTTGCAACTGGAGGAAGCTGGATTGCCCAGAAGGGTTCATGGGCCATATCCAAAACGGTTGCGTTTTGGAGATTTAG 1065 0.5718 MELISGLPQDVARDCLIRVSYQQFPTVASVCKLWKSEILSPEYHRQRRSTKNAQKLIAMVQARDQPGTGSIKRVTNPVYRLSVFEPETGHWNELLPPPEFYSGLPMFCQLVSVGYDLVLLGGLDPNSWKASNSVFVYNFLSAEWRRAADMPGGPRTFFACASDSKGTVFVAGGHDNEKNALRSALVYEVTSDRWVSLPDMAAERDECKGVFRRGKFFVVGGYPTEKQGRFERSAEAFDPATWRWDEVKEDFLDCATCPRTLVDGGDDEAVFLCSAGDLISLRGNTWQKISTVPGEIRNVAYIGALDGTLVLIGSSGYGEVHVAFAFDLESCNWRKLDCPEGFMGHIQNGCVLEI* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0128 354 Pfam Kelch motif 165 200 IPR006652 GO:0005515
Vra9g0128 354 SMART kelc_smart 167 214 IPR006652 GO:0005515
Vra9g0128 354 SMART kelc_smart 116 164 IPR006652 GO:0005515
Vra9g0128 354 PANTHER OS02G0208700 PROTEIN 1 354 IPR044595 GO:0080037|GO:2000762
Vra9g0128 354 Gene3D - 68 340 IPR015915 GO:0005515
Vra9g0128 354 SUPERFAMILY F-box domain 3 53 IPR036047 GO:0005515
Vra9g0128 354 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 1 354 - -
Vra9g0128 354 SUPERFAMILY Kelch motif 76 336 IPR015915 GO:0005515
Vra9g0128 354 Pfam Kelch motif 105 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0128 Vra-Chr9 849919 851485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0128 4 253 EF-hand Containing Proteins AT4G39560 24.514 1.29e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0128 - - gmx:100796602 621.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0128 9 849919 851485 Vra9g0128 9 849919 851485 ECH
Vra5g2421 5 31334926 31336408 Vra9g0128 9 849919 851485 PCT