Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0127 ATGGGCGCTTCTCTGCCGAACAAGGAGGCCAACCTCTTCAAGCTCATCGTCAAATCGTATGAAACCAAACAGTATAAAAAGGGCCTCAAAGCTGCTGATACCATTTTGAAAAAATTTCCAGACCATGGAGAAACTTTATCGATGAAGGGTTTGACACTAAATTGCATGGATCGTAAGTCTGAAGCATATGAACTTGTTCGTCAAGGATTAAAGAATGACCTTAAAAGTCATGTTTGCTGGCATGTTTATGGTCTCCTTTATCGATCAGACAGAGAATACAGGGAAGCGATCAAGTGCTATCGAAATGCACTGAAAATAGATCCTGACAATATTGAAATTCTTCGTGACCTATCACTCCTACAGGCACAAATGCGAGATTTATCAGGCTTTGTTGAGACAAGACAACAACTTTTGACTTTGAAGCCAAATCATCGCATGAATTGGATTGGATTTTCCGTAGCCCATCATTTGAACTCTAATGCATCCAAAGCAGTTGAAATTTTGGAAGCGTATGAAGGGACTTTGGAAGAGGATTATCCTCCAGAAAATGAACGGTGTGAGCATGGGGAAATGCTTTTGTACAAGATCTCGTTGTTAGAGGAATGTGGGTTTCTCGAGAGAGCTCTTGAGGAGTTGCACAAAAAAGAATTTAAAATTGTTGATAAGCTTGCATACAAAGAACAGGAGGTGTCACTTTTAGTAAAACTTGGTCACTTACAAGAAGGCGAAGCTTTGTACCAGGCATTACTTTCCATGAATCCTGATAATTATAGATACTATGAAGGACTTCAAAAGTGTGTTGGACTTTATTTAGAAGATGGACAGTACTCGCCTGATCAAATAGACCAGTTAGATTCCTTGTACAAAACACTTGTACAACAATACAAGTGGTCTTCTGCTGTTAAGAGAATACCGCTAGATTTTCTACAAGGTGACAAATTTCGAGAAGCAGCAGACAATTATATTAGGCCTCTCTTAACCAAGGGCGTTCCCTCTCTGTTCTCTGATCTATCCTCTTTGTACAATCACCCTGGGAAGGCAGACATTTTGGAACAACTTATTCTTGAGTTAGAGCAGTCAATTAGGATGACAGGCCAATATCCCGGAGGGACGAACAAAGAACCCCCTTCAACTCTTATGTGGACTTTGTTTTTATTGGCTCAGCATTATGACAGGCGGGGTCAATTTGAAATTGCTCTTTCTAAAATTGATGAAGCTATAGAACATACACCCACAGTCATTGATCTATATTCTGTCAAGAGTCGGATACTGAAGCATGCTGGTGATTTGGTTGCTGCTGCTGCATTTGCAGATGAAGCTAGGTGTATGGATCTTGCTGATCGTTATGTTAATAGTGAGTGTGTTAAACGGATGCTGCAGGCTGATCAGGTGTCTTTGGCTGAAAAAACTGCTGTATTGTTCACAAAGGATGGGGATCAACACAATAACCTTCATGACATGCAGTGCATGTGGTATGAGCTTGCATCGGGCGAAAGCTATTTCCGCCAGGGTGATCTTGGACGGGCACTCAAAAAATTTTTAGCCGTGGAGAAGCATTATGCTGATATCACGGAGGACCAATTTGATTTTCATTCTTACTGCTTGCGGAAAATGACATTGCGATCTTACGTGGAAATGCTTAAATTTCAAGACCAATTGCACTCACATTCATATTTTCACAAAGCAGCCGCTGGGGCTATCAGATGCTATATTAAGTTGCATGATTCTCCCCCAAAGTCTACAGCAGAGGAAGATGATGATATGGCGAAGTTACTTCCTTCTCAGAAGAAGAAAATGAGGCAAAAGCAGAGAAAGGCAGAAGCAAGAGCCAAAAAAGAGGCAGAAGAAAAGAATGAAGAGTTGAGTGCAAGTGGGATATCGAAGTCTGGGAAGCGGCATGTAAAACCTGTTGATCCTGATCCAAACGGGGAGAAGTTGTTAAAGGTTGAAGATCCACTGTCAGAAGCTACTAAATACTTGAAGTTGCTGCAGAAGAATTCCCCTGATTCATTGGAGACACACTTACTCTCTTTTGAATTGTATACAAGGAAGCAAAAGACTTTGCTTGCCTTTCAGGCTGTGAAGCAGTTACTGAGATTGGACCCTGAACACCCTGATTCTCATCGTTGCCTGATTAAATTCTTCCATAAAGTGGGATCCATGAATGCTCCTGTGACTGACAGTGAGAAACTGATTTGGAGTGTCTTAGAGGCTGAGCGACCAAATATTAGCCAGGTGCATGAGAAATCCCTGTTTGAGGCAAACAACTCTGTCCTTGACAAACATAAAGATTCTTTGATGCATAGAGCAGCTTTTGTAGAAATCTTGCACATTTTGGATTCAAACAGAAAATCCGAGGCTGTTAAGTTCATTGAAGAAACAACAAATAACACTGTGCCCAGAAATGGTGCACTTGGACCAATCAGGGAATGGAAACTTAAAGACTGTATTGCAGTTCACAATCTTCTAGAAACAGTTCTTGCTGATCAGGATGCTGCATTGAGATGGAAGGTGCGATGTGCGGATTACTTTCCATATTCTACGTACTTTGAGGGAAAGCACAGCTCTGCCTCTCCCAACTCGGCCTTCAACCAGTTACGTAAGAACGCTGAAAATGAGAGTGTTAACCACATCACATCAAACGGGAAACTAGAGGCATTTAAAGATCTTACTATCTGA 2679 0.4136 MGASLPNKEANLFKLIVKSYETKQYKKGLKAADTILKKFPDHGETLSMKGLTLNCMDRKSEAYELVRQGLKNDLKSHVCWHVYGLLYRSDREYREAIKCYRNALKIDPDNIEILRDLSLLQAQMRDLSGFVETRQQLLTLKPNHRMNWIGFSVAHHLNSNASKAVEILEAYEGTLEEDYPPENERCEHGEMLLYKISLLEECGFLERALEELHKKEFKIVDKLAYKEQEVSLLVKLGHLQEGEALYQALLSMNPDNYRYYEGLQKCVGLYLEDGQYSPDQIDQLDSLYKTLVQQYKWSSAVKRIPLDFLQGDKFREAADNYIRPLLTKGVPSLFSDLSSLYNHPGKADILEQLILELEQSIRMTGQYPGGTNKEPPSTLMWTLFLLAQHYDRRGQFEIALSKIDEAIEHTPTVIDLYSVKSRILKHAGDLVAAAAFADEARCMDLADRYVNSECVKRMLQADQVSLAEKTAVLFTKDGDQHNNLHDMQCMWYELASGESYFRQGDLGRALKKFLAVEKHYADITEDQFDFHSYCLRKMTLRSYVEMLKFQDQLHSHSYFHKAAAGAIRCYIKLHDSPPKSTAEEDDDMAKLLPSQKKKMRQKQRKAEARAKKEAEEKNEELSASGISKSGKRHVKPVDPDPNGEKLLKVEDPLSEATKYLKLLQKNSPDSLETHLLSFELYTRKQKTLLAFQAVKQLLRLDPEHPDSHRCLIKFFHKVGSMNAPVTDSEKLIWSVLEAERPNISQVHEKSLFEANNSVLDKHKDSLMHRAAFVEILHILDSNRKSEAVKFIEETTNNTVPRNGALGPIREWKLKDCIAVHNLLETVLADQDAALRWKVRCADYFPYSTYFEGKHSSASPNSAFNQLRKNAENESVNHITSNGKLEAFKDLTI* 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0127 892 Gene3D - 505 725 - -
Vra9g0127 892 Gene3D - 2 503 - -
Vra9g0127 892 PANTHER BNAC02G23120D PROTEIN 10 878 - -
Vra9g0127 892 ProSiteProfiles TPR repeat profile. 77 110 IPR019734 GO:0005515
Vra9g0127 892 MobiDBLite consensus disorder prediction 593 646 - -
Vra9g0127 892 SMART tpr_5 43 76 IPR019734 GO:0005515
Vra9g0127 892 SMART tpr_5 77 110 IPR019734 GO:0005515
Vra9g0127 892 SMART tpr_5 380 413 IPR019734 GO:0005515
Vra9g0127 892 MobiDBLite consensus disorder prediction 631 646 - -
Vra9g0127 892 PIRSF NAT_A 1 818 IPR021183 -
Vra9g0127 892 PANTHER N-TERMINAL ACETYLTRANSFERASE-RELATED 10 878 - -
Vra9g0127 892 SUPERFAMILY TPR-like 21 262 IPR011990 GO:0005515
Vra9g0127 892 Pfam TPR repeat 84 123 - -
Vra9g0127 892 Pfam N-terminal acetyltransferase A, auxiliary subunit 187 696 IPR021183 -
Vra9g0127 892 MobiDBLite consensus disorder prediction 606 622 - -
Vra9g0127 892 Coils Coil 596 624 - -
Vra9g0127 892 SUPERFAMILY TPR-like 381 707 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0127 Vra-Chr9 821594 834699 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0127 K20792 - gmx:100820094 1646.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0127 9 821594 834699 Vra9g0127 9 821594 834699 ECH
Vra5g2418 5 31296876 31311718 Vra9g0127 9 821594 834699 PCT