Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0116 ATGGCCGCCTTTGTTCAAACCGGGGGCCTTCTCTCTCTCCCCACCAACCCCAAATCCAGGGCTTCTCTTTCCCGTCATCTGAACCCTTCTCACGGCCTCAAAAACCGTTTTATCTCTCTGAACCCCAAACCCATCTCCGCCCCTTCTCTCTCCGCCGCCAAATTTCAACCCCTCGGTTCCAAGCCCAAAAATTTATTCATCTGCCGAGCCGAGGCGGCCGCCGCCGCAGATGGGTCGGCCCAGCCCGCCTTCGGAGAGGCCGAGGCTGAGAAGCCGAAACTCTTGGGCATCGAGATCAGCACCTTGAAGAAAATCATCCCTCTGGGTATGATGTTCTTTTGCATCCTTTTTAATTACACGATTCTCAGAGACACCAAGGATGTCCTTGTTGTCACTGCTAGAGGGAGCAGTGCAGAGATTATTCCGTTTCTAAAAACTTGGGTGAACCTTCCCATGGCTGTTGGATTTATGTTGTTGTACACCAAGTTGGCCAATGTTTTGTCAAAGCAAGCTCTTTTCTATTCCGTTATTCTTCCCTTCATTGCTTTTTTTGGGGCTTTTGGGTTTGTACTGTACCCTCTCAGCAACTATATTCACCCCGAGGCGTTTGCGGATAAGCTTCTCAACATCCTCGGACCAAGGTTCCTTGGCCCCCTTGCGATTATGAGAATTTGGAGTTTCTGTTTGTTCTATGTCATGGCTGAGTTGTGGGGGAGTGTCGTCATTTCCGTGCTCTTTTGGGGATTTGCTAATCAGATAACTACTGTTGAGGAAGCAAAACGATTCTACCCATTGTTTGGACTCGGGGCCAATGTAGCCCTTATTTTCTCTGGGAGGACTGTGAAATACTTTTCTAACCTGAGGCAGAATTTGGGTCCTGGAGTTGATGGTTGGGCCATCTCTCTAAAAGCAATGATGAGTATAGTTGTGGGTATGGGTTTCGCAATCTGTTTCCTGTACTGGTGGGTGAATAACTATGTTCCTCTTCCTACACGTAGCAAGAAGAAGAAGGAGAAGCCAAAAATGGGTACAATGGAGAGTTTGAAGTTCTTGGTGTCTTCCAAGTACATCAGAGATCTTGCTACTTTAGTGGTTGCTTATGGAATCAGCATCAATCTTGTTGAGGTTACTTGGAAGTCTAAGCTCAAAGCTCAATTTCCTAGCCCCAACGAGTACTCTTCTTTTATGGGCGACTTCTCAACTGCAACTGGAATTGCCACATTCACAATGATGCTTGTGAGCCAATTTATATTTGACAAATATGGATGGGGAGTTGCTGCCACAATCACTCCTACGGTCCTGCTTTTGACAGGAGTTGGTTTCTTTTCTCTTTTATTGTTCGGTGGCCCACTTGCACCTGGTCTTGCACAGTTTGGAATGACTCCACTTCTAGCAGCTGTATATGTAGGTGCTTTGCAGAACATATTTAGCAAGAGTGCCAAGTACAGTTTGTTTGATCCCTGCAAAGAAATGGCCTACATTCCATTGGATGAGGATACCAAGGTTAAAGGCAAGGCAGCCATTGATGTTGTGTGCAACCCGTTGGGGAAGTCTGGAGGTGCCCTTATTCAGCAATTTATGATCTTAACTTTTGGGTCACTCGCAAATTCAACCCCATACCTAGGAGGAGTGCTTCTGCTGATTGTTTCAGCCTGGCTAGCAGCAGCCAAATCGTTGGACACCCAGTTTACTGCATTGCGTAAAGAGGAAGAACTGGAGAAAGAGATGGAAAGAGCAGCCGCCGTTAAGATACCCGTGGTGGCTGAGAATGACGGTGGAAATGGTTCTCTTGCAACTGGTGCACCCTTAGATCCAGCCTCAGGTGACTCCTCAAGTAGTCCATCCGAAGCCTCCTCTCCTCGCAACATTTGA 1872 0.4728 MAAFVQTGGLLSLPTNPKSRASLSRHLNPSHGLKNRFISLNPKPISAPSLSAAKFQPLGSKPKNLFICRAEAAAAADGSAQPAFGEAEAEKPKLLGIEISTLKKIIPLGMMFFCILFNYTILRDTKDVLVVTARGSSAEIIPFLKTWVNLPMAVGFMLLYTKLANVLSKQALFYSVILPFIAFFGAFGFVLYPLSNYIHPEAFADKLLNILGPRFLGPLAIMRIWSFCLFYVMAELWGSVVISVLFWGFANQITTVEEAKRFYPLFGLGANVALIFSGRTVKYFSNLRQNLGPGVDGWAISLKAMMSIVVGMGFAICFLYWWVNNYVPLPTRSKKKKEKPKMGTMESLKFLVSSKYIRDLATLVVAYGISINLVEVTWKSKLKAQFPSPNEYSSFMGDFSTATGIATFTMMLVSQFIFDKYGWGVAATITPTVLLLTGVGFFSLLLFGGPLAPGLAQFGMTPLLAAVYVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGGVLLLIVSAWLAAAKSLDTQFTALRKEEELEKEMERAAAVKIPVVAENDGGNGSLATGAPLDPASGDSSSSPSEASSPRNI* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0116 623 MobiDBLite consensus disorder prediction 589 623 - -
Vra9g0116 623 Pfam TLC ATP/ADP transporter 92 563 IPR004667 GO:0005471|GO:0006862|GO:0016021
Vra9g0116 623 PANTHER - 1 597 IPR004667 GO:0005471|GO:0006862|GO:0016021
Vra9g0116 623 MobiDBLite consensus disorder prediction 605 623 - -
Vra9g0116 623 PANTHER ADP,ATP CARRIER PROTEIN 2, CHLOROPLASTIC 1 597 - -
Vra9g0116 623 SUPERFAMILY MFS general substrate transporter 220 554 IPR036259 -
Vra9g0116 623 TIGRFAM AAA: ADP/ATP carrier protein family 97 563 IPR004667 GO:0005471|GO:0006862|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0116 Vra-Chr9 723903 727839 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0116 1 598 Organic Solute Cotransporters AT1G80300 78.537 0.0 941
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0116 K03301 - gmx:100793284 1076.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0116 9 723903 727839 Vra9g0116 9 723903 727839 ECH
Vra5g2403 5 31162191 31165754 Vra9g0116 9 723903 727839 PCT