Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0115 ATGGCGAAGGGAGGGCAATGCTTCTTCGAGAAGCTTCGGCGGTGCGTTCGGACGGTTTTCTTCGTGGTGGCATTGGTGGCGTCGTTGGCGGTTACGTCGCTGCCGGTGGTTGTGGCGGTGGTTGACGTTTTGGTGCCGTGCTTTTTGATTTCGAACTTCACCTGTGTCAAGTGTTTCAGCTTCAAGGAGCATTTTCACCGTTACGCTTTCAACAGTTCCTTGATGGACATTCCGCTCGTTTCGGTCATAAGATCGCTTATCATTCTCTGTGTTTATTCCGTTTGTGATGCTCCTGCTCTCTCACACGGTCCTTACCTTGGAACTGTGACTCTGTGCTCCTTTCTGTCGATTGTTCTCCTTTCGGTCAAAGCTTGTGTGTTCACTGTAAATTCACATATCGAAGCGGAGGCTTCAGCTTCCTTCAGGAAGCAGAGACTTCATTTGAAGAAGCCATGGGGAATGCCTGTCTTGTTTCTTTCATCAGTCGTGTTTGCCCTTGGCCATACTGTGGTTGCTTATAGAACCAGCTGCAGAGCACGCAGAAAGCTCTTGTTTCATCGAGTTGACCCTGAAGCTGTTCTATCGTGCAAAAATGTTTTCTCTGGCTATCCAAAGGTCCCACGATCTCCCACTCCTTCTGTTGGGAGAACCCCCAAAAGTGACTATGAAACAAGGCGAAGACCTTTTGGGACTGCTCGTGATGAAGAACTGCTTGTCAGATTACTTGCAAACTCTGACAGCTTATTCATTACATGCCAAGGACTTACACTGCATTACAAGCTAAGCTTGCCAGGTTCACTTCCACATTCGTTGTCTTCAATGTCCTGTATTGAGTCAAATTCTAGCCGCATTACTTCAGCAATGGCTGCTGGGTTGGCAAAACCTAATAAACATTTTATAAGTACATCTCCGAATGTCCAGCCACAATTGTACAGGAGCTATAGCAATCAATTCCATGGCCCATCACTACATGTTCCTCTATTGGATGGTCCTATAACTTCTATTATTTCTGAAGATGTCCCCGTTTTTCACCTCGATGGTATTTGTGAAGATGAAACTAATAAATTAGATTTTCAATCTATGGACAAAAATGCAAAGAATGTTGGCCAATTAGGTCTTGTTTTAATTCATGGGTTTGGTGGAGGAGTCTTCTCTTGGAGGCATGTGATGGGATCTTTAGCTCGGCAGAGTAATTGCTCAGTTGCTGCATTCGATAGACCTGGTTGGGGATTAAGTTCAAGGCCTCGCAGGGAGGACTGGGAGGAAAAAGAGTTGCCTAATCCTTATAAGCTTGAAACTCAGGTTGACCTGCTTTTATCATTCTGTTCGGAGATTGGATTTTCTTCAGTGGTGTTAATTGGGCATGATGATGGAGGATTGCTGGCCCTTATGACTGCACAAAAAAATAAATCATCACTGAATTATTTCAATGTTGATGTGAAAGGGGTTGTATTGCTAAATGTCAGCTTGTCCAGGGAAGTGGTTCCATCCTTTGCAAGAATTCTTCTGCATACCTCACTTGGAAAGAAGCATTTGGTTCGCCCTCTACTAAGAACAGAAATCACTCAAGTGGTGAATCGGCGTGCTTGGTATGATCCTACCAAAATGACACAAGAAGTTTTGACCCTCTACAAGGCTCCACTATTTGTAGAAGGATGGGACGAGGCACTTCATGAGATTGGTAAATTGTCATCCGAAACCATCCTTTCAACTAAAAACGCAGAATCATTATTACAAGCTGTAGGAGACATTCCAGTGTTAGTCATTGCAGGTTCTGAGGATTCCCTTGTTTCTTTGAAATCATGTCAAGCTATGGCCTCAAAACTTGTAAATTCTAGATTGGTTGCCATATCTGGATGTGGCCATTTACCCCATGAAGAGTGTCCAAAGGCATTGCTTGCAGCTATCTCACCCTTCATCAATAGACTCTTATTTACATCTGACTTGCAAAGCCAATAA 1959 0.44 MAKGGQCFFEKLRRCVRTVFFVVALVASLAVTSLPVVVAVVDVLVPCFLISNFTCVKCFSFKEHFHRYAFNSSLMDIPLVSVIRSLIILCVYSVCDAPALSHGPYLGTVTLCSFLSIVLLSVKACVFTVNSHIEAEASASFRKQRLHLKKPWGMPVLFLSSVVFALGHTVVAYRTSCRARRKLLFHRVDPEAVLSCKNVFSGYPKVPRSPTPSVGRTPKSDYETRRRPFGTARDEELLVRLLANSDSLFITCQGLTLHYKLSLPGSLPHSLSSMSCIESNSSRITSAMAAGLAKPNKHFISTSPNVQPQLYRSYSNQFHGPSLHVPLLDGPITSIISEDVPVFHLDGICEDETNKLDFQSMDKNAKNVGQLGLVLIHGFGGGVFSWRHVMGSLARQSNCSVAAFDRPGWGLSSRPRREDWEEKELPNPYKLETQVDLLLSFCSEIGFSSVVLIGHDDGGLLALMTAQKNKSSLNYFNVDVKGVVLLNVSLSREVVPSFARILLHTSLGKKHLVRPLLRTEITQVVNRRAWYDPTKMTQEVLTLYKAPLFVEGWDEALHEIGKLSSETILSTKNAESLLQAVGDIPVLVIAGSEDSLVSLKSCQAMASKLVNSRLVAISGCGHLPHEECPKALLAAISPFINRLLFTSDLQSQ* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0115 652 Pfam Alpha/beta hydrolase family 373 634 IPR000073 -
Vra9g0115 652 PANTHER HYDROLASE 3 646 - -
Vra9g0115 652 PRINTS Epoxide hydrolase signature 377 395 IPR000639 GO:0003824
Vra9g0115 652 PRINTS Epoxide hydrolase signature 452 465 IPR000639 GO:0003824
Vra9g0115 652 PRINTS Epoxide hydrolase signature 584 600 IPR000639 GO:0003824
Vra9g0115 652 PRINTS Epoxide hydrolase signature 617 639 IPR000639 GO:0003824
Vra9g0115 652 Gene3D alpha/beta hydrolase 362 643 IPR029058 -
Vra9g0115 652 MobiDBLite consensus disorder prediction 207 227 - -
Vra9g0115 652 PANTHER ALPHA/BETA FOLD HYDROLASE 3 646 - -
Vra9g0115 652 SUPERFAMILY alpha/beta-Hydrolases 373 642 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0115 Vra-Chr9 708519 713116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0115 5 648 Miscellaneous Gene Families AT1G80280 63.678 0.0 789
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0115 - - gmx:100817742 1115.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0115 9 708519 713116 Vra9g0115 9 708519 713116 ECH
Vra5g2402 5 31146307 31151417 Vra9g0115 9 708519 713116 PCT