Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0112 ATGTTGCGGAGGTTTCTATCTTCCAACCTAAAAACCCTAGCCGCCGCTTCTTCCTCCTCTCTTACTTCCCGATCTGCTTCCGCCGCCGCCAGATTCCCCGCTCTTTCTCGCTCCTACCGCTACTTCTCAACTCAATCCGAGGATGCTACTGCGATCAAAAAGAAGGTTGAGGATGTAATGCCTATCGCTACCGGACACGAGCGCGAGGAGCTTGAAGCTGAGCTCGAGGGAAGGGATATTCTTGAAATAGACCATCCCGAAGGTCCATTCGGCACAAAGGAAGCACCTGCCATTGTAAAATCTTACTATGATAAAAGGATAGTTGGATGCCCAGGCGGTGAAGGCGAGGATGAGCATGATGTTGTCTGGTTTTGGCTGGAGAAAGGCAAGCCTCATGAATGTCCTGTGTGCGCACAATATTTTGTTCTTGAAGTGGTAGGACCTGGTGGACCACCCGATGGACATGGCGATGATGATCACCACCATTGA 489 0.5072 MLRRFLSSNLKTLAAASSSSLTSRSASAAARFPALSRSYRYFSTQSEDATAIKKKVEDVMPIATGHEREELEAELEGRDILEIDHPEGPFGTKEAPAIVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCAQYFVLEVVGPGGPPDGHGDDDHHH* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0112 162 Gene3D Cytochrome c oxidase, subunit Vb 52 146 IPR036972 GO:0005740|GO:0005751|GO:0006123
Vra9g0112 162 PANTHER - 6 162 - -
Vra9g0112 162 Pfam Cytochrome c oxidase subunit Vb 62 149 IPR002124 GO:0005740|GO:0005751|GO:0006123
Vra9g0112 162 PANTHER CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL 6 162 IPR002124 GO:0005740|GO:0005751|GO:0006123
Vra9g0112 162 SUPERFAMILY Rubredoxin-like 52 149 - -
Vra9g0112 162 CDD Cyt_c_Oxidase_Vb 51 146 IPR002124 GO:0005740|GO:0005751|GO:0006123
Vra9g0112 162 ProSiteProfiles Cytochrome c oxidase subunit Vb, zinc binding domain profile. 51 150 IPR002124 GO:0005740|GO:0005751|GO:0006123
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0112 Vra-Chr9 692872 697307 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0112 K02265 - gmx:100780886 231.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2398 5 31105379 31108446 Vra9g0112 9 692872 697307 PCT