Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2398 ATGTTGCGGAGATTCCTCTCTCATTCCAATCTCAGATCTCTACACACGGCGCTCTCACCTTCTCGTCCCCGATTCGCCGCCCCTCTCCTCACCCGCCACGTCACTGCTCAATCAGGCGCTTCTTCCGTCAGAAAGAGGGTCGAAGATGTCGTGCCAATTGCTACCGGCCACGAGCGTGAGGAGATTCAGGCCAGTCTCGAGGGAAGGGATATTCTTGAAATCAACCATCCTGAAGGTCCTTTCGGCACAAAGGAAGCACCTGCTATTGTTAAATCTTACTTTGACAGAAGGATAGTTGGATGCCCAGGAGGTGAAGGTGAAGATGAGCATGATGTTGTATGGTTTTGGCTGGAGAATGGCAAGCCTCATGAATGTCCAGTGTGCTCACAGTACTTTGAGCTCAAAGTGGTCGGACCTGGTGGTGATCCTTATGGACACGGCGATCATCATTGA 453 0.5143 MLRRFLSHSNLRSLHTALSPSRPRFAAPLLTRHVTAQSGASSVRKRVEDVVPIATGHEREEIQASLEGRDILEINHPEGPFGTKEAPAIVKSYFDRRIVGCPGGEGEDEHDVVWFWLENGKPHECPVCSQYFELKVVGPGGDPYGHGDHH* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2398 150 PANTHER CYTOCHROME C OXIDASE SUBUNIT 5B 1 149 - -
Vra5g2398 150 Pfam Cytochrome c oxidase subunit Vb 54 142 IPR002124 GO:0005740|GO:0005751|GO:0006123
Vra5g2398 150 CDD Cyt_c_Oxidase_Vb 45 139 IPR002124 GO:0005740|GO:0005751|GO:0006123
Vra5g2398 150 Gene3D Cytochrome c oxidase, subunit Vb 44 137 IPR036972 GO:0005740|GO:0005751|GO:0006123
Vra5g2398 150 ProSiteProfiles Cytochrome c oxidase subunit Vb, zinc binding domain profile. 41 141 IPR002124 GO:0005740|GO:0005751|GO:0006123
Vra5g2398 150 SUPERFAMILY Rubredoxin-like 44 140 - -
Vra5g2398 150 PANTHER CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL 1 149 IPR002124 GO:0005740|GO:0005751|GO:0006123
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2398 Vra-Chr5 31105379 31108446 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2398 K02265 - gmx:100801050 251.906
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2398 5 31105379 31108446 Vra5g2398 5 31105379 31108446 ECH
Vra5g2398 5 31105379 31108446 Vra9g0112 9 692872 697307 PCT