Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0111 ATGAGCTATGGACATTATCATATGGGCTCTGGTAGTAGAACTGGTCGGAGAAGTTTGGAGTTTGGGAAGACACATGTGGTGAGGCCAAAAGGAAAACACCAAGCCACTATAGTTTGGCTGCATGGTCTTGGTGACAATGGTTTAAGCTCATATCAGTTGCTGGAATCTCTTCCACTTCCAAATATAAAATGGATTTGCCCAACTGCTCCTACTCGCCCTGTAACAATACTTGGTGGATTTTCCTGCACTGCATGGTTTGACATGGGAGAACTTTCAGAAGACGGTCCAGATGATTGGGAGAGTTTAGATGCCTCAGCAGCACACATTGCCAACTTGTTATTAACAGAGCCAGCTGATGTGAAAGTTGGAATTGGAGGCTTCAGTATGGGTGCTGCAGTAGCTCAATACTCTGCAACTTGTTTTGCCATGGGAAGGTATGGAAATGGCATCCCGTATCCAGTGAACTTAAGAGCAGTTGTTGGACTAAGTGGCTGGCTTCCAGGATCAATGAGCTTAAGGAACAAAATCGAAGTGTCACATGAAGCTAGAAGGAGAGCTGCTTCATTACCTCTTTTGCTGGGCCATGGAATCTGTGATGATGTAGTCCTCTACAAATACGGAGAGAAATCAGCTCAATCCTTAAGTTCAGCAGGCTTCCGATACATTACATTCAAATCCTATGATGGGCTTGGTCACTATACTGTTCCAAGGGAGATGGATGAAGTCTCCAATTGGCTTAACTCAAGGCTGGGGCTTGGGGGATCATCATGA 771 0.4514 MSYGHYHMGSGSRTGRRSLEFGKTHVVRPKGKHQATIVWLHGLGDNGLSSYQLLESLPLPNIKWICPTAPTRPVTILGGFSCTAWFDMGELSEDGPDDWESLDASAAHIANLLLTEPADVKVGIGGFSMGAAVAQYSATCFAMGRYGNGIPYPVNLRAVVGLSGWLPGSMSLRNKIEVSHEARRRAASLPLLLGHGICDDVVLYKYGEKSAQSLSSAGFRYITFKSYDGLGHYTVPREMDEVSNWLNSRLGLGGSS* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0111 256 Gene3D alpha/beta hydrolase 16 251 IPR029058 -
Vra9g0111 256 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 255 - -
Vra9g0111 256 Pfam Phospholipase/Carboxylesterase 24 247 IPR003140 GO:0016787
Vra9g0111 256 SUPERFAMILY alpha/beta-Hydrolases 25 250 IPR029058 -
Vra9g0111 256 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 255 - -
Vra9g0111 256 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0111 Vra-Chr9 681315 685109 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0111 6 255 Acyl Lipid Metabolism Gene Families AT3G15650 74.400 3.73e-125 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0111 K06130 - gmx:100782153 501.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0111 9 681315 685109 Vra5g2397 5 31095175 31097691 ECH
Vra9g0111 9 681315 685109 Vra9g0111 9 681315 685109 ECH
Vra5g2397 5 31095175 31097691 Vra9g0111 9 681315 685109 PCT