Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2397 ATGAGTCATGCACATTCTCATACGGGCTCTGGCAGCAGAATCACTCGAGGTACTTTTGAGTTTGGAAAGACATATGTTGTGAGACCCAAAGGAAAACACCAAGCCACTATAATTTGGTTGCATGGTCTTGGTGACAATGGTTTGAGCTCATCTCAGCTTTTGGAATCCCTTCCACTTCCAAATATAAAATGGATTTGTCCAACTGCCCCCACCCGTCCTGTGGCAATACTTGGTGGTTTTCCCTGCACAGCATGGTTTGATGTGGGAGAACTTTCAGAAGATGGCCCAGATGATTGGGAGGGTTTGGATGCCTCAGCAATACACATTGCTAACTTGTTGTCAACAGAGCCAGCTGATGTGAAAGTTGCTATTGGAGGCTTCAGCATGGGTGCAGCAATAGCCCTATACTCTGCAACTTGTTTTGCCATAGGAAGGTATGGAAATGGCATTCCCTACCCTGTCAATCTAAGAACAGTGGTTGGACTTAGTGGTTGGCTTCCAGGATCAAGGAGCTTAAGGAACAAGATAGAAGTATCACATGAAGCAAGAAGACGAGCAACTTCATTACCCATTTTGTTGTGCCATGGAATCAGTGATGATGTGATCCTTTACAAATATGGTGAAAAATCAGCTCAATCTTTATGCTCAGCAGGGTTTCGATATGTTGCATTCAAATCCTATGATGGGCTTGGTCATTACACAATTCCTAGAGAGATGGATGAAGTTTGCACTTGGCTTAGTTCAAAGTTGGGGCTTGAAGGATCCTCGTAA 771 0.441 MSHAHSHTGSGSRITRGTFEFGKTYVVRPKGKHQATIIWLHGLGDNGLSSSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSEDGPDDWEGLDASAIHIANLLSTEPADVKVAIGGFSMGAAIALYSATCFAIGRYGNGIPYPVNLRTVVGLSGWLPGSRSLRNKIEVSHEARRRATSLPILLCHGISDDVILYKYGEKSAQSLCSAGFRYVAFKSYDGLGHYTIPREMDEVCTWLSSKLGLEGSS* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2397 256 SUPERFAMILY alpha/beta-Hydrolases 25 250 IPR029058 -
Vra5g2397 256 Gene3D alpha/beta hydrolase 14 251 IPR029058 -
Vra5g2397 256 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 256 - -
Vra5g2397 256 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 256 - -
Vra5g2397 256 Pfam Phospholipase/Carboxylesterase 25 247 IPR003140 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2397 Vra-Chr5 31095175 31097691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g2397 9 255 Acyl Lipid Metabolism Gene Families AT3G15650 77.328 4.96e-131 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2397 K06130 - gmx:100781212 501.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0111 9 681315 685109 Vra5g2397 5 31095175 31097691 ECH
Vra5g2397 5 31095175 31097691 Vra5g2397 5 31095175 31097691 ECH
Vra5g2397 5 31095175 31097691 Vra9g0111 9 681315 685109 PCT