Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0103 ATGGCTGGTCTGCAAAGATCTGCGGTGTCTTTCAGGAGACAAGGTTCATCAGGGCTTGTTTGGGACGACAAATTAGTGTCTGCTGAACTGAACAACGATCAAAACCAAGACCCAAAGGCTGCCGCTACTGCTGCTGCCGACAACCTTAACGCAAGAACAACACCACCACCCACCACCACAATCCAGAGAACCCGCTCCAACGGCTACCGCATGGGAAAAGTCTCGCCGGCGATCGACCCTCCCTCTCCAAAGCTCTCTGCTTGCGGCTTCTGCACCGCCTTCTCTAAAACAGGGGAAAAGGGTCGCCCCGCAAAGACCAGCGCTAAGCACCGATCCAGGTAG 342 0.5526 MAGLQRSAVSFRRQGSSGLVWDDKLVSAELNNDQNQDPKAAATAAADNLNARTTPPPTTTIQRTRSNGYRMGKVSPAIDPPSPKLSACGFCTAFSKTGEKGRPAKTSAKHRSR* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0103 113 Pfam Domain of unknown function (DUF4666) 1 100 IPR031421 -
Vra9g0103 113 PANTHER - 1 110 - -
Vra9g0103 113 MobiDBLite consensus disorder prediction 31 69 - -
Vra9g0103 113 MobiDBLite consensus disorder prediction 31 82 - -
Vra9g0103 113 PANTHER OS05G0542732 PROTEIN-RELATED 1 110 IPR031421 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0103 Vra-Chr9 650079 651117 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0103 - - pvu:PHAVU_010G154100g 162.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2389 5 31030992 31031666 Vra9g0103 9 650079 651117 PCT