Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2389 ATGGCTGGTCTTCAAAGATCTGCGGTCTCTTTCAGAAGGCAGGGTTCTTCTGGCTTTGTTTGGGACGATAGATTCTTATCAGAGGAATTCAACCAAAACCAAACCAGCAACATCCACGCCGATCAGATTAAAGACCTTCAACTTCAACCGGAACCGCCCCTCCAGAGAACCCGCTCCAACGGCGGAACTCGTGCCTACCGCACCGGAAAAGTCTCCCCGGCGATCGAACCCCCGTCTCCCAGACTCTCCGCATGCGGCTTCTGCGCCGCGTTCGGAAAAGCACCACCACGGGACCACAACAAGCCACAGCGGAACAAACCCGCCAAGCATCGACCGAGGTAG 342 0.5614 MAGLQRSAVSFRRQGSSGFVWDDRFLSEEFNQNQTSNIHADQIKDLQLQPEPPLQRTRSNGGTRAYRTGKVSPAIEPPSPRLSACGFCAAFGKAPPRDHNKPQRNKPAKHRPR* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2389 113 PANTHER - 1 106 - -
Vra5g2389 113 Pfam Domain of unknown function (DUF4666) 1 97 IPR031421 -
Vra5g2389 113 PANTHER OS05G0542732 PROTEIN-RELATED 1 106 IPR031421 -
Vra5g2389 113 MobiDBLite consensus disorder prediction 32 113 - -
Vra5g2389 113 MobiDBLite consensus disorder prediction 52 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2389 Vra-Chr5 31030992 31031666 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2389 - - gmx:100783364 166.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2389 5 31030992 31031666 Vra9g0103 9 650079 651117 PCT