Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0100 ATGGAAGCAATCACGGAGGGAGTGAACAACATCAATATCACCGAAACTTACAAGAAGAATCGTATTCAGGTCTCCAATACCAAAAAGCCTCTCTTCTTTTACGTTAATCTCGCCAAGAGGTACATGCAACAACATAATGAGGTCGAACTCTCAGCACTGGGAATGGCTATTGCTACAGTTGTTACTGTTGCTGAAATCTTGAAAAACAACGGGCTTGCTGTTGAAAAGAAAATCATGACATCAACAGTTGACATAAAAGATGATTCCAGAGGAAGACCTGTCCAGAAGGCCAAGATTGAAATATTGTTGGGAAAGACTGCAAACTTCGATGAGTTGATGGCTGCAGCGGCTGCTGAAGATGGTGAAAATGGAGATGCTGAAGAGCAAACAAATTAG 396 0.4167 MEAITEGVNNINITETYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLAVEKKIMTSTVDIKDDSRGRPVQKAKIEILLGKTANFDELMAAAAAEDGENGDAEEQTN* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0100 131 Gene3D - 18 130 IPR036882 GO:0003676
Vra9g0100 131 PANTHER - 1 129 - -
Vra9g0100 131 PANTHER DNA/RNA-BINDING PROTEIN ALBA 3 1 129 IPR014560 -
Vra9g0100 131 PIRSF UCP030333_Alba 1 131 IPR014560 -
Vra9g0100 131 SUPERFAMILY AlbA-like 19 114 IPR036882 GO:0003676
Vra9g0100 131 Pfam Alba 20 75 IPR002775 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0100 Vra-Chr9 630766 633112 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0100 - - gmx:100527472 226.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0100 9 630766 633112 Vra9g0100 9 630766 633112 ECH
Vra5g2385 5 31005551 31008044 Vra9g0100 9 630766 633112 PCT