Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2385 ATGGAAGGCATAACAGAGGGAGTGAACAACATCAACATCACCGATTCCTACAAGAAGAATCGCATTCAGGTCTCTAACACTAAGAAGCCCCTCTTCTTCTACGTTAATCTGGCCAAGAGGTACATGCAACAGCATAACGAGGTCGAACTTTCAGCTCTAGGAATGGCTATTGCCACAGTGGTAACTGTTGCTGAAATTTTGAAAAACAACGGACTTGCTGTGGAGAAGAAAATCACGACATCAACTGTTGACATAAAGGACGATTCCAGAGGTAGACCTGTTCAGAAGGCCAAGATTGAAATTGTACTTGGAAAAACAGCAAACTTCGATGAATTGATGGCGGCTGCTGCTGCTGAAGACGGTGAAAATGGAGACGCTGAAGAGCAAAACGCATAA 396 0.4394 MEGITEGVNNINITDSYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLAVEKKITTSTVDIKDDSRGRPVQKAKIEIVLGKTANFDELMAAAAAEDGENGDAEEQNA* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2385 131 PANTHER DNA/RNA-BINDING PROTEIN ALBA 3 1 125 IPR014560 -
Vra5g2385 131 PIRSF UCP030333_Alba 1 131 IPR014560 -
Vra5g2385 131 PANTHER - 1 125 - -
Vra5g2385 131 SUPERFAMILY AlbA-like 19 114 IPR036882 GO:0003676
Vra5g2385 131 Pfam Alba 20 82 IPR002775 GO:0003676
Vra5g2385 131 Gene3D - 18 130 IPR036882 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2385 Vra-Chr5 31005551 31008044 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2385 - - lang:109351177 235.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2385 5 31005551 31008044 Vra5g2385 5 31005551 31008044 ECH
Vra5g2385 5 31005551 31008044 Vra9g0100 9 630766 633112 PCT