Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0004 ATGGATTGGTTCTCATGGCTCTCAAAAACAAGCCTTGAGCCAACCCTAGTGTATGAGTATGGTCTTACTTTTGCACACAATGAGCTTGAAGAAGAAGACATGATATACTTCAACCATGAGTTTCTGATGAGCATGGGAATCTCCATAGCCAAACACAGGCTAGAGATTCTGAAGTTGGCAAGGAAAGTCAAGGGAAAGAGAGCACCACGGCCTGTGGCAAGGCTCATGGTGGCGATCAAGAGGACCAAGAGGTGCTTGGCCAATTACTTTCGCACGTTCATCAGCTGTGAAGAAGAGTCTGCGGCACTTGTTGTGGTGCCATCATCATCATCATCAAGGACAAGGCCTTATGGGACAAGATGGAAGACTCATGTCATGAAGAGGAACAAAAGCAAAAAGTTGATGGTGGCTAAGCAAGAGAGGCTCTTGCTCACGAATGGAAGTCCCAACACTGTGATGCATGGTCTTGATGGTTTTACCAGTCCCATGGTTTACCATTTCAACAAGGAGGAAAAAAAGGAAGGAGACGATGATGATGGTGGTGGATACTGGTCTTCAGCTGCTGCTGCTGCAGAAGAAATCAGGTGGGATACCATGTTTCAGGATCTAAAGCCAAACTGA 621 0.4622 MDWFSWLSKTSLEPTLVYEYGLTFAHNELEEEDMIYFNHEFLMSMGISIAKHRLEILKLARKVKGKRAPRPVARLMVAIKRTKRCLANYFRTFISCEEESAALVVVPSSSSSRTRPYGTRWKTHVMKRNKSKKLMVAKQERLLLTNGSPNTVMHGLDGFTSPMVYHFNKEEKKEGDDDDGGGYWSSAAAAAEEIRWDTMFQDLKPN* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0004 206 CDD SAM_superfamily 2 62 - -
Vra9g0004 206 Gene3D - 1 68 IPR013761 -
Vra9g0004 206 PANTHER OSJNBA0033G05.11 PROTEIN 1 206 - -
Vra9g0004 206 PANTHER OSJNBA0033G05.11 PROTEIN 1 206 - -
Vra9g0004 206 SUPERFAMILY SAM/Pointed domain 6 67 IPR013761 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0004 Vra-Chr9 38090 39291 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0004 - - pvu:PHAVU_010G157800g 313.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0004 9 38090 39291 Vra9g0004 9 38090 39291 ECH
Vra5g1965 5 25340409 25341908 Vra9g0004 9 38090 39291 PCT