Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1965 ATGGACTGGTTTTCGTGGCTTTCCAAAACTGGGCTTGAGCCATCTCTGGTGTACGAGTATGGCCTTACTTTTGCTCACAACGAGCTTGAAGAAGATGACATGTTTTACTTCAACCATGAGTTTCTTCAAAGCATGGGCATCTCCATAGCAAAGCACAGACTAGAGATCCTGAAGCACGCTAGAAAAGAGAAGGGAAAGAGCCCACGCGCGGTGGCAAAGCTCGTGGTGGCAATCAAGCGGACAAAGAGGAACTTGGCTAACTATGTGAGGACACTGATGCACAAAGAAGAATCATCATCAGCACTTGTTTTGGTGCCTCCACCAAGGTCTAGTAATGGTTTAGGGACACGGTGGAAGATTGCTACGATGAAGAGGAGAAAAAAGTTGGTGGTGGCCAAGCAAGAGCCACTCTTTCTAACAAATGGAAGTCCCACAGTGGTTCCAGCTCATCCTGTTCTTGATGGTTTTTCCAGTCCTGTGGTGTATCATTTCCAGAAGGATAAGATGGATGGTGATGATGATGGAGATGGGTACTGGTCAGCTGCTGTTGAAGAGATCAAGTGGGATACCATGTTTCAGGATCTAAAGCCTAACTGA 597 0.4657 MDWFSWLSKTGLEPSLVYEYGLTFAHNELEEDDMFYFNHEFLQSMGISIAKHRLEILKHARKEKGKSPRAVAKLVVAIKRTKRNLANYVRTLMHKEESSSALVLVPPPRSSNGLGTRWKIATMKRRKKLVVAKQEPLFLTNGSPTVVPAHPVLDGFSSPVVYHFQKDKMDGDDDGDGYWSAAVEEIKWDTMFQDLKPN* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1965 198 Gene3D - 1 70 IPR013761 -
Vra5g1965 198 CDD SAM_superfamily 2 62 - -
Vra5g1965 198 SUPERFAMILY SAM/Pointed domain 5 64 IPR013761 -
Vra5g1965 198 PANTHER OSJNBA0033G05.11 PROTEIN 1 198 - -
Vra5g1965 198 PANTHER OSJNBA0033G05.11 PROTEIN 1 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1965 Vra-Chr5 25340409 25341908 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1965 - - gmx:102660142 308.145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1965 5 25340409 25341908 Vra9g0004 9 38090 39291 PCT