Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2429 ATGCCAACAGCTATGAAGGTTCTTGTCCACCGACTTCTGATGTCCTTCGTCTTCTCTTGCTTACTGTGTTGGGCAATGCAAGATGGAGTACAGGCTACGGTGCGCAGCACTCCACAGAGTACATGGTGGAAGCCACTTTCAAGCAATGCAGGGGATGATGACTCTCCTCCAAGGCCCTTGAAGGTTACTTTCGCTGGGCCTGCAACTCACTGGACAGATGCCATCCCCATTGGCAATGGCCGTCTCGGTGCCATGGTTTGGGGTGGCGTACCCTCCGAACTTCTCCAGCTCAATGAGGATACACTTTGGACTGGGATCCCTGGAGACTACACCAACAAAAGTGCTCCACAAGCACTGGCTGAAGTCAGAAAGCTTGTTGATGATAGAAAATTCTCTGAAGCTACCGCAGCAGCTGTCAAGCTGTCAGGAGAGCCTTCCGATGTATACCAACTTCTCGGTGATATCAAGATAGAGTTTCATGATTCCCATCTTAAATATTCAAAGGAGTCTTATTACAGGGAGCTGGATTTGGATACTGCTACCGCAAAAGTAAAATACTCTGTGGGTGATGTAGAATTTACTAGAGAGCATTTTGTTTCTAATCCAGACCAAGTAATAGTGACAAGGTTGTCTGCAAGCAAACCTGGGTCATTATCATTTACAGTGTATTTTGATAGCAAAATGCATCATGATTCAAAGGTAAGTGGCCAAAATCAGATAATAGTTGAAGGGAGATGTCCTGGTAGTAGGATCCGACCGAGACTGAATTCAATTGACAATCCAATGGGGATTCGGTTTTCTGCAGTTTTTGATATGCAGATTAGTAACGGGGTTATAGAAGTTTTAGATGATAGGAAGCTAAAAGTTGAAGGTTCAGATTCGGCTATTTTGCTTTTGACAGCTTCTTCTTCCTTTGATGGCCCATTTACTATGCCTGAAGACTCAAAGAAGGACCCTACTTCTGAGTCCCTCAGTAAAATGAAGTCTGTGAAAAGTTTTTCTTATGCTGATCTTTATGCACGACACTTAGATGACTATCAAAATCTATTTCACCGCGTCTCATTGCAACTCTCTAAAAGCTCAAAGACTGGTTTGGGAAAATCTGTTTTCTACAAAAGGCAGTCAGTTTCCTCCCAAACAAACATCTCTCAAAAGGAGGGTGACACCATTCCAACTTCAGCAAGAGTCAAATCTTTTCAAACTGATGAGGACCCTTCCTTTGTTGAGCTTTTGTTTCAATATGGTCGATATCTCCTAATCTCTTGTTCACGTCCTGGATCTCAGGTGGCAAACCTACAGGGTATCTGGAACAAAGATGTTGAGCCTGCATGGGATGGTGCTCCTCACTTGAACATTAATCTTCAAATGAATTATTGGCCAGCCCTTTCTAGCAACCTACACGAGTGTCAAGAGCCCTTATTTGATTTCATTTCGTCTCTGTCAGCCAATGGTAAAAAAACTGCAAAGGTGAACTATGAAACAAATGGTTGGGTTGCACATCAAGTTTCTGACATATGGGCTAAAACATCACCAGATAGAGGTGAGGCTGTTTGGGCTTTATGGCCTATGGGTGGAGCTTGGCTTTGTGCCCATTTATGGGAGCATTATACTTATACAATGGACAGAGATTTTCTTAAAAATAAAGCATACCCTTTGTTGGAAGAATGTACATCATTTTTGTTGGATTGGTTGATTGAAGGCCGTGGTGGATTATTAGAAACTAACCCATCAACTTCACCAGAGCACATGTTCACTGCACCAGACCGAAAGCCTGCTAGTGTGAGCTACTCATCAACCATGGACATTTCAATCATAAAAGAAGTTTTCTCTATAATCATTTCTGCTGCTGAGGTTTTGGGAAGACACGATGACGCAATCATCAAAAGAGTCACTATGTATCAGTCTAAGCTTCCTCCGACAAAACTTTCTAGAGATGGTTCCATTATGGAATGGGCAGAAGATTTTGAGGACCCAGATGTACATCATCGACATGTTTCACATCTGTTTGGACTATTTCCCGGGCACACGATTAGTCTTGAGAAAACTCCAGTCCTCTGTAAAGCTGTGGAATCTAGTCTAATTAAAAGAGGAGATGATGGCCCAGGATGGTCGACAACTTGGAAAGCTTCATTGTGGGCACATCTTCATAATAGTGAGCATGCGTATCGTATGATAAAACACTTGATTGTATTGGTAGACCCTGATCATGAAAGTGATTACGAAGGAGGACTTTATAGCAACCTGTTCACAACACATCCCCCTTTTCAGATTGATGCTAACTTTGGTTTTTCTGGAGCAATAGCAGAAATGCTTGTTCAGAGCACAATGAAGGACCTTTACTTGCTTCCAGCATTGCCAGGCGATAAATGGGCCAATGGTTGTGTGAAAGGATTGAAAGCTCGTGGCGGGGTAACAGTCAACATTTGCTGGAAAGAAGGAGATCTAAGTGAAGTTGGGCTTTGGTCAGAAAGGCTGAATTCCCAAGTAAGACTACATTATAGAGGAACCGTGGTCTTAACAAGTTTATCACCTGGCAGAGTTTACTCATATAATAACCTATTGAAGTGCGTGAGGACATACTCTCTCCCTCAGAAAAGTTAA 2601 0.4271 MPTAMKVLVHRLLMSFVFSCLLCWAMQDGVQATVRSTPQSTWWKPLSSNAGDDDSPPRPLKVTFAGPATHWTDAIPIGNGRLGAMVWGGVPSELLQLNEDTLWTGIPGDYTNKSAPQALAEVRKLVDDRKFSEATAAAVKLSGEPSDVYQLLGDIKIEFHDSHLKYSKESYYRELDLDTATAKVKYSVGDVEFTREHFVSNPDQVIVTRLSASKPGSLSFTVYFDSKMHHDSKVSGQNQIIVEGRCPGSRIRPRLNSIDNPMGIRFSAVFDMQISNGVIEVLDDRKLKVEGSDSAILLLTASSSFDGPFTMPEDSKKDPTSESLSKMKSVKSFSYADLYARHLDDYQNLFHRVSLQLSKSSKTGLGKSVFYKRQSVSSQTNISQKEGDTIPTSARVKSFQTDEDPSFVELLFQYGRYLLISCSRPGSQVANLQGIWNKDVEPAWDGAPHLNINLQMNYWPALSSNLHECQEPLFDFISSLSANGKKTAKVNYETNGWVAHQVSDIWAKTSPDRGEAVWALWPMGGAWLCAHLWEHYTYTMDRDFLKNKAYPLLEECTSFLLDWLIEGRGGLLETNPSTSPEHMFTAPDRKPASVSYSSTMDISIIKEVFSIIISAAEVLGRHDDAIIKRVTMYQSKLPPTKLSRDGSIMEWAEDFEDPDVHHRHVSHLFGLFPGHTISLEKTPVLCKAVESSLIKRGDDGPGWSTTWKASLWAHLHNSEHAYRMIKHLIVLVDPDHESDYEGGLYSNLFTTHPPFQIDANFGFSGAIAEMLVQSTMKDLYLLPALPGDKWANGCVKGLKARGGVTVNICWKEGDLSEVGLWSERLNSQVRLHYRGTVVLTSLSPGRVYSYNNLLKCVRTYSLPQKS* 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2429 866 PIRSF UCP007663 31 863 IPR016518 GO:0004560
Vra8g2429 866 Pfam Glycosyl hydrolase family 65, N-terminal domain 64 307 IPR027414 -
Vra8g2429 866 SUPERFAMILY Six-hairpin glycosidases 317 826 IPR008928 GO:0005975
Vra8g2429 866 Gene3D - 294 771 IPR012341 GO:0005975
Vra8g2429 866 PANTHER - 55 864 - -
Vra8g2429 866 PANTHER ALPHA-L-FUCOSIDASE 2 55 864 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2429 Vra-Chr8 42363767 42370215 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2429 K15923 - gmx:100817294 1544.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2429 8 42363767 42370215 Vra8g2429 8 42363767 42370215 ECH
Vra11g0022 11 219079 226080 Vra8g2429 8 42363767 42370215 PCT