Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0022 ATGGAAGCGGAAGCGCGTAGAAGTTCGGACTTGAAGATTAGGTTCGGAGAAGAAGGTGGGAAGCACTGGACTGATGCGCTTCCCATTGGCAATGGACGCCTCGGAGCCATGATCTGCGGCCGCCTCCATTCCGAAACCATCCACCTCAACGAGGACACGCTCTGGACCGGAACACCCGCGGACTACACTAATTCTAAAGCTCCACAANCCCTTTCTCTGGTTAGAAACCTCGTTAACCGTCAACAATATCCACAAGCCACTGCTGCTGCTTCTGCCTTAACAGGATCAAATCCATCCGAGGCCTACCAACTTCTCGCCGATATCAAATTGGACTTCGATTATTCACATCTCACCGGCGCTCAACAAACTTACCAGAGGGAGCTGGACTTGGATACTGCTACTGTCAAGGTCAGCTATTCCGTTGGAGATGTTCAGTTCAAAAGGGAGCATTTTGCCTCCTATCCAGATCAAGTCATTGTCACTAACATTTCCGCCACCCAAAAGGCCAGACTTTCATTCACACTTTCTCTGGACAGCAAAATGATTAATCAAACCTACGTAAATGGCACCAATCAGATTATAATGAAGGGAGCGTGTCGTGGTAAAAGGTTCCCACCTCAACTCCAACACAGCGCACAAGATACTCCGCAGGGAATTCAATTCTCGGCAATTCTTGACTTGAAGATTGGTGGTGCAAATGGCGTCATCAGTGTTTTGGATGACAACAAGTTGAAGGTTGAGGCTTCAGATTGGGCTGTTTTACTTCTGGTTGCTTCCTCCTCCTTCAGTGGCCCGTTCACATCACCTTCAGATTCTAAGAGGGATCCTACTTCTGAGTGTTTCAGTGTATTGAGCTCAATAAGCAATGTATCAAATTCTGACCTCTATGCACGCCATTTAAATGACTATCAAGAACTTTTTCACCGGGTATCGCTGAAGCTTATGAGAAGCACCCAGCCGAATATGCCAGAAGACAGCTCTTTGGAATTGAAGACGCTTGCGCCAACGGTAGCTAGTCTGTCTCTAGTGGACAGTCAAACTCAAGTTTCAACCTCTGACAGGGTGAAATCATTTCAGACGGACGAAGATCCATCGTTGGTGGAACTTCTATTTCAATATGGTCGGTATTTGCTTATTTCTTCTTCGCGCCCTGGAACTCAGGTGGCAAACCTACAGGGAATTTGGAACAAAGATCTTGAGCCTATTTGGGATGGAGCTCCCCACTTGAACATCAATCTTGAAATGAACTATTGGCATGCTCTTCCTTGCAATCTTAGCGAGTGTCAAGAACCCTTGTTTGATTATATTTCCTCTCTGTCTGTGAATGGCAGTAAAACAGCATATGTGAATTACCAAGCAAGTGGATGGGTAGCACATAGTAAATCAGATATATGGGCAAGAACATCAGCAGGTCATGGTGATGTTCTGTGGGCTTTATGGCCAATGGGTGGAGCATGGCTTTGTACCCATCTATGGGAGCACTATGCTTACACGATGGATAAGGGTTTCCTTGAATATAAAGCATATCCCATAATGGAAGGATGTGTCTCATTTCTGTTGAGCTGGCTGATAGAAGACAATGAAGGATATCTTGAAACTAATCCATCAACTTCCCCTGAACACAATTTTATTGCTCCAAACGGTGAGCCTGCATGTGTAAGCCAGTCATCCACAATGGATGTGGCAATCATACATGAAGTCTTCTCTACATTTCTTTCTGCTGCTGAGGTTATAGGGAGAACAAATGACAATATTGTCAGAAAAATTTGTAAAGCTCAACCACGGTTACGTCCACTCTATATTGCCCAAGATGGTTCCATTATGGAATGGGTGAAAGATTTCAAGGATCCAGAGGTACATCACCGGCACCTTTCACATCTATTTGGTCTATTTCCAGGGCATACAATTACTTTTGAGCAAACTCCAGCTCTGTTTGAAGCTGCTGAGAAAAGCCTCTATAAACGAGGAGAGGAAGGTCCTGGGTGGTCAACCACGTGGAAAACTGCTTGCTGGGCACGTCTACAGAACAGTTCGAATGCATATAAGATGATCAAGCGCTTGATAAACTTGGTGGATCCGGGTCACGAGATACCGTTTCAAGGTGGACTTTACAGCAACCTGTTTGCAGCGCATCCACCATTTCAGATCGATGCCAACTTCGGTTTTGCAGCGGCAGTTGCCGAAATGCTTGTGCAGAGTACATTGAGCGATCTTTTCTTACTTCCTGCTCTTCCATGGGAGAAATGGCCAAATGGCTCCTTGAAAGGCTTGAAGGCTCGTGGAGGAACAACAGTTAACATATGCTGGAGAGAAGGGGATCTTCAGGAGTTTAGTGTATGGTCCGAGGACCAAACAAGAACAACTCTGAGAAAAAGAATACACTATAAAGAAACTATGGTCACCGCAGACTTAATGACTGGCGTTTTTTACAGGTTCAACGGACAGTTGAAGTGTTTGAACTCATGCTCTCTTTCAGAAATGGCGTCTTCTTGA 2493 0.4529 MEAEARRSSDLKIRFGEEGGKHWTDALPIGNGRLGAMICGRLHSETIHLNEDTLWTGTPADYTNSKAPQXLSLVRNLVNRQQYPQATAAASALTGSNPSEAYQLLADIKLDFDYSHLTGAQQTYQRELDLDTATVKVSYSVGDVQFKREHFASYPDQVIVTNISATQKARLSFTLSLDSKMINQTYVNGTNQIIMKGACRGKRFPPQLQHSAQDTPQGIQFSAILDLKIGGANGVISVLDDNKLKVEASDWAVLLLVASSSFSGPFTSPSDSKRDPTSECFSVLSSISNVSNSDLYARHLNDYQELFHRVSLKLMRSTQPNMPEDSSLELKTLAPTVASLSLVDSQTQVSTSDRVKSFQTDEDPSLVELLFQYGRYLLISSSRPGTQVANLQGIWNKDLEPIWDGAPHLNINLEMNYWHALPCNLSECQEPLFDYISSLSVNGSKTAYVNYQASGWVAHSKSDIWARTSAGHGDVLWALWPMGGAWLCTHLWEHYAYTMDKGFLEYKAYPIMEGCVSFLLSWLIEDNEGYLETNPSTSPEHNFIAPNGEPACVSQSSTMDVAIIHEVFSTFLSAAEVIGRTNDNIVRKICKAQPRLRPLYIAQDGSIMEWVKDFKDPEVHHRHLSHLFGLFPGHTITFEQTPALFEAAEKSLYKRGEEGPGWSTTWKTACWARLQNSSNAYKMIKRLINLVDPGHEIPFQGGLYSNLFAAHPPFQIDANFGFAAAVAEMLVQSTLSDLFLLPALPWEKWPNGSLKGLKARGGTTVNICWREGDLQEFSVWSEDQTRTTLRKRIHYKETMVTADLMTGVFYRFNGQLKCLNSCSLSEMASS* 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0022 830 PIRSF UCP007663 1 814 IPR016518 GO:0004560
Vra11g0022 830 Pfam Glycosyl hydrolase family 65, N-terminal domain 20 263 IPR027414 -
Vra11g0022 830 PANTHER - 7 828 - -
Vra11g0022 830 PANTHER ALPHA-L-FUCOSIDASE 2 7 828 - -
Vra11g0022 830 SUPERFAMILY Six-hairpin glycosidases 274 783 IPR008928 GO:0005975
Vra11g0022 830 Gene3D - 252 730 IPR012341 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0022 Vra-Chr11 219079 226080 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0022 K15923 - gmx:100777878 1420.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0022 11 219079 226080 Vra8g2429 8 42363767 42370215 PCT