Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2419 ATGCCATCACAAAGCAAAATGAAGCTTCTCTTTGCCACCCTACTGCTTTCTTCTCTTCTTCTAAGCTCCTCTTTCTTGGAGACAGCCATGGCGTACGAAGAATCATCTTATTGCAGCAGCAAGTGTTCGGATAGGTGCTCTGCCGCAGGGGTTAAGGATAGATGTCTGAAGTACTGTGGAATATGCTGTTCGGAGTGCAAATGCGTTCCTTCTGGAACCTATGGGAACAAGCACGAGTGTCCTTGCTACAGGGACAAGCTCAACAAGAAGGGCAAGCCCAAATGCCCTTGA 291 0.4811 MPSQSKMKLLFATLLLSSLLLSSSFLETAMAYEESSYCSSKCSDRCSAAGVKDRCLKYCGICCSECKCVPSGTYGNKHECPCYRDKLNKKGKPKCP* 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2419 96 Pfam Gibberellin regulated protein 38 96 IPR003854 -
Vra8g2419 96 PANTHER PEAMACLEIN-LIKE 7 96 - -
Vra8g2419 96 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 7 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2419 Vra-Chr8 42310733 42311351 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2419 - - vra:106771497 181.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2419 8 42310733 42311351 Vra8g2419 8 42310733 42311351 ECH
Vra5g1465 5 21339421 21339841 Vra8g2419 8 42310733 42311351 ECH