Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1465 ATGAAGATTGTGTATGCAAATGTGCTCCTTGTGTTCCTCATCCTTAGCTCCTCTTTCTTGGAAATCTCAATGGCTGGTTCAGCTTTCTGTGACTCAAAGTGTAAAGGGAGATGTGCGAAGGCTGAGCTTAAGAAGAGATGCTTGAAGTACTGTGGAATCTGCTGCAAGAAGTGCAACTGTGTGCCATCTGGGACTTACGGAAACAAGGACGAGTGTCCTTGCTACAGGGATATGAAGAACTCTAAGGGCAAGGGCAAATGCCCTTGA 267 0.4607 MKIVYANVLLVFLILSSSFLEISMAGSAFCDSKCKGRCAKAELKKRCLKYCGICCKKCNCVPSGTYGNKDECPCYRDMKNSKGKGKCP* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1465 88 Pfam Gibberellin regulated protein 29 88 IPR003854 -
Vra5g1465 88 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 1 88 - -
Vra5g1465 88 PANTHER GIBBERELLIN-REGULATED PROTEIN 10 1 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1465 Vra-Chr5 21339421 21339841 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1465 - - gmx:100306110 154.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1465 5 21339421 21339841 Vra8g2419 8 42310733 42311351 ECH
Vra5g1465 5 21339421 21339841 Vra5g1465 5 21339421 21339841 ECH
Vra6g1823 6 34702510 34703883 Vra5g1465 5 21339421 21339841 PCT