Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2305 ATGTTAAAACAGGTTCGTCTTCTTCTTCTCTTCTTGGCCTCTGGATTGACCCTCTCCGTTTCAGAGTCCCAATCTGTTTCTCTTCTGCCTCATGCTGCTGACTCCTTCAATGTCAGCTATATCCAGCTGAAGAACGCGGCGACTTGTTCTTACTTGGTGGTTATATCTACTAGTTGTTCGTCTCCTAGGTATACGAGAGATCAGATCAGTATCGCTTTTGGGGATGCTTATGGAAATCAGATATATATACCAAGACTGGATGATCCAACTTCTGGTACATTCGAGAGTTGTAGTTCAGATACATTTCAAATAAGTGGTCCGTGTGCATATCAGATATGTTATGTATACCTATATAGACACGGATCAGATGGTTGGAGGCCTGAAAGTGTGAAAATCAATAGTTATAATGGCAGGGCTGTTACTTTCTATTACAACACATATATCCCCGGTGATACTTGGTATGGATTTGATTTGTGCAGCGGTGCTTCTTCTTCGAACCAGGTATCCAAGCAGAAATGGATTATATTTATGGTTCTAGGATTTGTTCTAAGTTTTTGGTCGTAA 564 0.4078 MLKQVRLLLLFLASGLTLSVSESQSVSLLPHAADSFNVSYIQLKNAATCSYLVVISTSCSSPRYTRDQISIAFGDAYGNQIYIPRLDDPTSGTFESCSSDTFQISGPCAYQICYVYLYRHGSDGWRPESVKINSYNGRAVTFYYNTYIPGDTWYGFDLCSGASSSNQVSKQKWIIFMVLGFVLSFWS* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2305 187 PANTHER - 5 186 - -
Vra8g2305 187 PANTHER EMBRYO-SPECIFIC PROTEIN 5 186 - -
Vra8g2305 187 CDD PLAT 49 159 - -
Vra8g2305 187 Gene3D PLAT/LH2 domain 45 156 - -
Vra8g2305 187 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 48 156 IPR036392 GO:0005515
Vra8g2305 187 Pfam Embryo-specific protein 3, (ATS3) 41 159 IPR010417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2305 Vra-Chr8 41303044 41305128 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2305 - - gmx:100499692 330.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2305 8 41303044 41305128 Vra8g2305 8 41303044 41305128 ECH
Vra1g0919 1 10691946 10693626 Vra8g2305 8 41303044 41305128 PCT