Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0919 ATGATAAAGTTTGTTCTTTTCTTGTTATGCTTTGCCTCTGCAGTGAGTGTATCAGTTTCAGAGTCCGAAGCTGTTTCTGTGAAACTTCATGCAGCTGAATCCTTCTCTGTTGGGTATATTCAGATGAAAACTGCATCAAACTGCTCTTACTTGGTGCTTATAAGCACGAGTTGTTCATCGCCCAAGTTCACGACGGATAAGATCAGTATTGCGTTTGGAGATGGTAAAGGAAACCAGGTGTATGTACCAAGACTAGATGATCCACTTGCAAAGACATTTGAACAATGTTCTTCAGACTCATTTCAGATAGATGGTGCATGTGCATCTCCCATCTGCTTTGTGTATCTTTATAGATCAGGTGCAGAGCAAGGTTGGAAGCCTGAGAGTGTGAAAATCTTTGGGTATGACTCAGAGCCTGTTACTTTTACTTTCGACACCTCCATTCCCAATGACACATGGTATGGCTACAATTTTTGCCAAACTCCTCCTTCTCCTTCTTCTTCATTCCAACCATCACCTCAGAAATGGCACATGAGTTTGCTTCTAGGCTTTTTTCTTAGCCTTCTGCATTAA 573 0.4154 MIKFVLFLLCFASAVSVSVSESEAVSVKLHAAESFSVGYIQMKTASNCSYLVLISTSCSSPKFTTDKISIAFGDGKGNQVYVPRLDDPLAKTFEQCSSDSFQIDGACASPICFVYLYRSGAEQGWKPESVKIFGYDSEPVTFTFDTSIPNDTWYGYNFCQTPPSPSSSFQPSPQKWHMSLLLGFFLSLLH* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0919 190 PANTHER EMBRYO-SPECIFIC PROTEIN 2 189 - -
Vra1g0919 190 Pfam Embryo-specific protein 3, (ATS3) 41 159 IPR010417 -
Vra1g0919 190 PANTHER - 2 189 - -
Vra1g0919 190 CDD PLAT 48 161 - -
Vra1g0919 190 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 45 156 IPR036392 GO:0005515
Vra1g0919 190 Gene3D PLAT/LH2 domain 30 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0919 Vra-Chr1 10691946 10693626 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0919 - - gmx:100305526 290.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g0919 1 10691946 10693626 Vra8g2305 8 41303044 41305128 PCT