Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2289 ATGGCCCACGTTACCTCCTCAGGTAAATCAAGCGATCTCACAAATGAAGACTGTAAGGGAAACGGTGGACCCGTTGTTTGCTTTGGTGAAATGTTAATAGATTTTGTGCCAACAGTGGGTGGAGTGTCACTAGCTGAAGCACCTGCATTCCAGAAAGCTGCTGGTGGTGCTCCTGCCAATGTGGCTGTTGGCATCGCTAGGCTTGGAGGTTCATCTGCTTTTGTAGGCAAGGTTGGAGCAGATGAATTTGGGTATATGCTGGCTGATATTTTAAAGCGGAATAATGTTGACACATCTGGCATAAAGTTTGACCATAATGCAAGAACTGCTTTAGCTTTTGTTACACTTAGAGCTGATGGCGAGCGTGAGTTTTTGTTTTTCCGAAATCCTAGTGCTGATATGCTTCTTCAAGAGTCAGAGCTTGCTACCGATCTCATAAAGAAGGCTAAAATATTCCATTATGGTTCCATCAGCTTGATTCACGAACCATGCAAGTCAGCTCATCTTGCTGCTATGAAAATTGCTAAAGACTCTGGTTGCATTCTCTCATATGATCCAAATTTGAGATTGGCACTATGGCCCTCTGCTGAGGCAGCTCGGAATGGCATAAAGAGTGTATGGGATCAAGCCGATGTCATAAAGATAAGTGAGGACGAGATAACATTTTTGACTGGTGGTGATGATCCTTATGATGATGATGTTGTATTAAAGAAGCTTTTTCACCATAATCTTAAGCTTTTAATCGTTACCGAAGGGTCAGGAGGTTGTAGATATTACACCCAGGAATTTAAGGGCAGGGTTGCAGGTGTCAAAGTTAATGCTGTTGACACAACTGGTGCAGGGGATGCATTTGTTAGTGGGATTATCTATAACTTGGCTTCTGACCAGAGTATTTTCCAGAATGAGGAACGTCTCCGAAAAGCTCTGTATTTTGCGAATGTATGTGGTGCCATTACGGTAACACAGAGAGGGGCAATTCCTGCACTACCCACAAAAGAAGCTGTCCTGCAATTCGCTGAAACATAA 1026 0.4327 MAHVTSSGKSSDLTNEDCKGNGGPVVCFGEMLIDFVPTVGGVSLAEAPAFQKAAGGAPANVAVGIARLGGSSAFVGKVGADEFGYMLADILKRNNVDTSGIKFDHNARTALAFVTLRADGEREFLFFRNPSADMLLQESELATDLIKKAKIFHYGSISLIHEPCKSAHLAAMKIAKDSGCILSYDPNLRLALWPSAEAARNGIKSVWDQADVIKISEDEITFLTGGDDPYDDDVVLKKLFHHNLKLLIVTEGSGGCRYYTQEFKGRVAGVKVNAVDTTGAGDAFVSGIIYNLASDQSIFQNEERLRKALYFANVCGAITVTQRGAIPALPTKEAVLQFAET* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2289 341 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 276 289 IPR002173 GO:0016773
Vra8g2289 341 PANTHER FRUCTOKINASE-7-RELATED 23 339 - -
Vra8g2289 341 SUPERFAMILY Ribokinase-like 25 338 IPR029056 -
Vra8g2289 341 Pfam pfkB family carbohydrate kinase 25 331 IPR011611 -
Vra8g2289 341 PRINTS Ribokinase signature 50 69 IPR002139 GO:0016301
Vra8g2289 341 PRINTS Ribokinase signature 205 220 IPR002139 GO:0016301
Vra8g2289 341 PRINTS Ribokinase signature 247 258 IPR002139 GO:0016301
Vra8g2289 341 CDD bac_FRK 25 326 - -
Vra8g2289 341 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 55 79 IPR002173 GO:0016773
Vra8g2289 341 PANTHER HEXOKINASE FAMILY MEMBER 23 339 - -
Vra8g2289 341 Gene3D - 23 341 IPR029056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2289 Vra-Chr8 41154205 41157386 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2289 K00847 - gmx:100818404 592.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2289 8 41154205 41157386 Vra1g0933 1 10931819 10935365 ECH
Vra8g2289 8 41154205 41157386 Vra8g2289 8 41154205 41157386 ECH
Vra1g0933 1 10931819 10935365 Vra8g2289 8 41154205 41157386 PCT