Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0933 ATGGCTCACCATATCTCGTCAGATCATTCCAATGATCTCAGAAAAGAAGACTGCAAGGAAACAGGTTCACTGGTTGTTTGCTTTGGTGAAATGTTAATAGACTTTGTTCCGACTGTGGGAGGAGTATCGCTGGCTGAAGCACCTGCTTTCAAGAAAGCTCCCGGTGGAGCTCCTGCCAATGTAGCTGTTGGTATCTCTAGATTGGGAGGTTCATCTGCTTTTATTGGCAAGGTTGGGGCAGATGAATTTGGGTATATGCTGGCAGACATTTTAAAGCAAAACAATGTTGAGACTTCTGGCATGCGGTTTGACTCTAATGCAAGAACAGCATTAGCTTTTGTTACACTTAGAGCAGATGGTGAACGTGAATTCTTGTTTTTCCGCAATCCAAGTGCTGATATGCTCCTTCAAGAATCAGAACTTGATAAAAATCTCCTAAAGCAGGCTAGAATATTCCATTATGGCTCCATCAGCTTGATTGATGAGCCATGCAAGTCAGCTCACCTTGCTGCTATGAGAATTGCCAAAAACTCTGGTTGCATTCTCTCTTATGATCCAAATTTGAGATTGGCTCTATGGCCTTCAGCAGATGCTGCTCGGAAAAGCATAATGGATATATGGGATCAGGCTGATGTCACAAAGATAAGTGAGGACGAAATTACATTTTTGACTGGAGGTGATGATCCTTATGACGATAATGTTGTTTTGAAGAAACTTTTTCATCCAAATCTCAAGCTTTTAATCGTTACTGAAGGGTCACAAGGTTGCAGATATTACACCAAAGCATTTAAGGGTAGGATTGCAGGTGTTAAAGTCAAACCTGTAGACACAACCGGTGCTGGCGATGCATTCGTTAGTGGGATTTTATACAGTATAGCTTCTGATCAAACTATTTTTCAGGATGAGAAACGTCTTAGAAAGGCTTTATATTTTGCCAATATATGTGGTGCACTCACTGTGACTGGGAGAGGTGCAATTCCTGCACTTCCTACAAAGGAAGCTATCTTGCAATTCTTACTTGAAGAAGCTGTAATATAA 1038 0.4123 MAHHISSDHSNDLRKEDCKETGSLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFIGKVGADEFGYMLADILKQNNVETSGMRFDSNARTALAFVTLRADGEREFLFFRNPSADMLLQESELDKNLLKQARIFHYGSISLIDEPCKSAHLAAMRIAKNSGCILSYDPNLRLALWPSADAARKSIMDIWDQADVTKISEDEITFLTGGDDPYDDNVVLKKLFHPNLKLLIVTEGSQGCRYYTKAFKGRIAGVKVKPVDTTGAGDAFVSGILYSIASDQTIFQDEKRLRKALYFANICGALTVTGRGAIPALPTKEAILQFLLEEAVI* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0933 345 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 276 289 IPR002173 GO:0016773
Vra1g0933 345 SUPERFAMILY Ribokinase-like 25 339 IPR029056 -
Vra1g0933 345 CDD bac_FRK 24 326 - -
Vra1g0933 345 Pfam pfkB family carbohydrate kinase 24 331 IPR011611 -
Vra1g0933 345 PANTHER FRUCTOKINASE-7-RELATED 17 341 - -
Vra1g0933 345 PRINTS Ribokinase signature 50 69 IPR002139 GO:0016301
Vra1g0933 345 PRINTS Ribokinase signature 205 220 IPR002139 GO:0016301
Vra1g0933 345 PRINTS Ribokinase signature 247 258 IPR002139 GO:0016301
Vra1g0933 345 Gene3D - 22 344 IPR029056 -
Vra1g0933 345 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 55 79 IPR002173 GO:0016773
Vra1g0933 345 PANTHER HEXOKINASE FAMILY MEMBER 17 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0933 Vra-Chr1 10931819 10935365 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0933 K00847 - gmx:100778752 624.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2289 8 41154205 41157386 Vra1g0933 1 10931819 10935365 ECH
Vra1g0933 1 10931819 10935365 Vra1g0933 1 10931819 10935365 ECH
Vra1g0933 1 10931819 10935365 Vra8g2289 8 41154205 41157386 PCT