Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2271 ATGGGGGCTGGTGTTTCTTCACCTGATAGAGCTGAAGACGAAGAAGGGTCTGGTTCTCATCCATCAAGACCTGGTCTTGGTGATATCCCAGAGAGTTGCATCTCCTCCTTGCTCATAAACCTTGATCCACCAGATATATGCAAATTGGCAAGGGTCAATAGGGCCTTTCACCGAGCTTCCTCAGCTGATTTTGTGTGGGAATCAAAGCTCCCACCAAGTTACAAGTTTCTTGCTAATAAAGTTCTTGGGGAACAAAATATTGCTACTATGACAAAGAAAGAGATTTATGCAAAACTTAGCCTACCCAATCGTTTTGATGGCGGCGCCAAAGAAGTTTGGTTGGACAAATGTAGTGGACTGGTTTGTTTGTTCATGTCATCCAAGTCCTTGAAGATTACAGGAATAGATGACAGAAGATACTGGAATTATATTCCGACCGAAGAATCCAGGTTCAAGAGTGTCGCGTATCTACAACAAATGTGGTGGGTTGAAGTGGTAGGGGAGCTAGAGTTTGAATTCCCTGTGGGGAGTTACAGCTTAGTTTTCAGACTCCAATTGGGCAAGGCCTCAAAGAGATTGGGCCGCCGTGTCTGCAACGTTGATCAAGTTCATGGTTGGGACATCAAGCCCGTCCGATTCCAACTCTCCACATCGGACGGCCAGCACTCACTCTCAGAATGTTACTTGCATGGACCTGGGGAATGGGTCTACTATCATGTTGGAGATTTCGTGGTCGAAAAGCCCAATGAGCCAACAATTATGAAGTTCTCATTGGCCCAAATTGATTGTACTCACACCAAAGGTGGGCTCTGCGTGGATAGTGCAATCATCTGCCCAACGCTGTTGAGAGAAAGACTAGAAAAAAGTTAA 870 0.4552 MGAGVSSPDRAEDEEGSGSHPSRPGLGDIPESCISSLLINLDPPDICKLARVNRAFHRASSADFVWESKLPPSYKFLANKVLGEQNIATMTKKEIYAKLSLPNRFDGGAKEVWLDKCSGLVCLFMSSKSLKITGIDDRRYWNYIPTEESRFKSVAYLQQMWWVEVVGELEFEFPVGSYSLVFRLQLGKASKRLGRRVCNVDQVHGWDIKPVRFQLSTSDGQHSLSECYLHGPGEWVYYHVGDFVVEKPNEPTIMKFSLAQIDCTHTKGGLCVDSAIICPTLLRERLEKS* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2271 289 MobiDBLite consensus disorder prediction 1 27 - -
Vra8g2271 289 PANTHER F-BOX PROTEIN PP2-A15 1 287 - -
Vra8g2271 289 Pfam Phloem protein 2 121 279 IPR025886 -
Vra8g2271 289 PANTHER F-BOX PROTEIN 1 287 - -
Vra8g2271 289 SUPERFAMILY F-box domain 16 80 IPR036047 GO:0005515
Vra8g2271 289 ProSiteProfiles F-box domain profile. 23 69 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2271 Vra-Chr8 40969135 40972037 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2271 - - gmx:100795463 536.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2271 8 40969135 40972037 Vra1g1919 1 36449840 36453582 ECH
Vra8g2271 8 40969135 40972037 Vra8g2271 8 40969135 40972037 ECH
Vra1g1919 1 36449840 36453582 Vra8g2271 8 40969135 40972037 PCT