Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2253 ATGTCTGTGCAACTGTGGGAGACCTTGAAGGAGGCCATAGTGCTCTACACTGGCCTAACTCCTTCCACCTTCTTCACGGTGCTCGCCCTAATTCTGGCCGCTTACTACGTCGTTTTGGGTTTCTTTGGGGGGCAGCCGGAGCGGCCCCGCCCCCGCCACACCGAGGAGGAGGAGATGCCGCCTCTGCGGCCGCCAGTCCAGCTCGGTGAGATCACCGCTGAGGAGCTCAAAGCCTACGACGGCACCGATACGGGTAAACCCTTGCTCATGGCCATCAAGGGACAGATCTACGATGTCTCCCAGAGCAGGATGTTTTATGGACCTGGTGGACCTTATGCTCTATTTGCTGGAAAGGATGCCAGCAGGGCTTTAGCTAAGATGTCTTTTGAAGAGAAAGATTTGACTGGGGATATTTCTGGCCTTGGCCCATTTGAGCTTGATGCTTTACAAGATTGGGAATATAAGTTCATGAGCAAGTATGTAAAGGTTGGAACTGTGAAAAGTGAACTTCCTGTGACTGAATCAGAGTCCACCGCAGAACCATCAGAAACTACTTCCCGTGATATTGATACTGCTTCTGCTGTCAAGCCCAATGAAGATGGCAAATCAGAAATTGGTGCTGTTAAAAAACGCAAGCTTTTTCGAAGATAA 651 0.5054 MSVQLWETLKEAIVLYTGLTPSTFFTVLALILAAYYVVLGFFGGQPERPRPRHTEEEEMPPLRPPVQLGEITAEELKAYDGTDTGKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELDALQDWEYKFMSKYVKVGTVKSELPVTESESTAEPSETTSRDIDTASAVKPNEDGKSEIGAVKKRKLFRR* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2253 216 MobiDBLite consensus disorder prediction 193 208 - -
Vra8g2253 216 PANTHER MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED 1 210 - -
Vra8g2253 216 PANTHER CYTOCHROME B5-LIKE HEME/STEROID-BINDING DOMAIN PROTEIN 1 210 - -
Vra8g2253 216 MobiDBLite consensus disorder prediction 170 192 - -
Vra8g2253 216 Gene3D - 69 167 IPR036400 -
Vra8g2253 216 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 62 167 IPR036400 -
Vra8g2253 216 Pfam Cytochrome b5-like Heme/Steroid binding domain 72 166 IPR001199 -
Vra8g2253 216 SMART Cyt_b5_2 71 167 IPR001199 -
Vra8g2253 216 MobiDBLite consensus disorder prediction 169 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2253 Vra-Chr8 40807434 40809691 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2253 K17278 - gmx:100791779 325.479
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2253 8 40807434 40809691 Vra8g2253 8 40807434 40809691 ECH
Vra1g1874 1 35739192 35743257 Vra8g2253 8 40807434 40809691 PCT