Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1874 ATGGCTCTGCAACTATGGGAGACACTGAAGGAAGCCATAATTGTCTACACCGGCCTTTCTCCGCCCACCTTCTTCACCCTCCTCGCCCTTATTCTCGCCATCTACTATGTAATTACGGGCCTCTTCCCCTCCTCCGACCACCGCCACGAGGCCCCCCGCGACTTCGAGCCCCAGATGGAGCCTCTGCGACCTCCCGTTCAGATCGGCGAGGTCACCGAGGAGGAACTCAAGGCCTACGACGGCTCTGATCCCGAGAAGCCCCTCCTCATGGCTATCAAGGGTCAGATCTATGATGTTTCGCAAAGCAGGATGTTTTATGGACCCAATGGACCGTATGCTCTATTTGCTGGGAAGGATGCTAGCAGAGCTTTGGCAAAAATGTCTTTTGAGGAGAAAGATCTAACTGGAGATATCTCTGGGCTTGGCCCTTTTGAGCTTGAGGCCTTGCAAGACTGGGAATACAAGTTTATGGGCAAGTATGTAAAAGTTGGAACTGTTAAACCGAAAGTTCCAGTGACTGAACCCTCAGAATCAACACCCCGTGATGCTGAATCTTCCAAGCCAACCGAAGATGGTCCATCAGAATCAGATGATATTAAAAATGACCCATCAGAATCAGCTGATGTTAAAAATGACGAACCCCCTCCAAAGGTTGATGCTGATAAAGAGTAA 672 0.5 MALQLWETLKEAIIVYTGLSPPTFFTLLALILAIYYVITGLFPSSDHRHEAPRDFEPQMEPLRPPVQIGEVTEEELKAYDGSDPEKPLLMAIKGQIYDVSQSRMFYGPNGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMGKYVKVGTVKPKVPVTEPSESTPRDAESSKPTEDGPSESDDIKNDPSESADVKNDEPPPKVDADKE* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1874 223 PANTHER MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED 1 206 - -
Vra1g1874 223 Gene3D - 69 167 IPR036400 -
Vra1g1874 223 MobiDBLite consensus disorder prediction 180 223 - -
Vra1g1874 223 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 64 167 IPR036400 -
Vra1g1874 223 Pfam Cytochrome b5-like Heme/Steroid binding domain 72 166 IPR001199 -
Vra1g1874 223 MobiDBLite consensus disorder prediction 169 223 - -
Vra1g1874 223 PANTHER CYTOCHROME B5-LIKE HEME/STEROID-BINDING DOMAIN PROTEIN 1 206 - -
Vra1g1874 223 SMART Cyt_b5_2 71 167 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g1874 Vra-Chr1 35739192 35743257 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1874 K17278 - gmx:100780914 331.257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g1874 1 35739192 35743257 Vra1g1874 1 35739192 35743257 ECH
Vra1g1874 1 35739192 35743257 Vra8g2253 8 40807434 40809691 PCT