Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2237 ATGGCTGTTCTTGACGAATGTAAATTAAAGTTCCTGGAGCTAAAGGCAAAGAGGAACTACCGTTTCATTGTGTTTAAGATTGAGAACTACGAAGTGATAGTGGAGAAACTTGGAAGCCCAGAAGAAACCTATGAGAACTTCACTGCATGTCTGCCTGCCAACGAGTGCCGATACGCTGTCTTTGATTTTGATTTCACAACAAATGAAAACTGCCAGAAAAGCAAGATTTTCTTCATTGCATGGGCTCCGGATACATCAAAGGTGAGAGAGAAGATGGTGTATGCCAGCTCCAAGGACAGATTCAAGAGGGAACTCGATGGCATTCAGGTTGAGTTGCAAGCAACGGATCCCAGTGAGATGAGCTTTGATATCATAAAAGCAAGGGCAATATAA 393 0.4275 MAVLDECKLKFLELKAKRNYRFIVFKIENYEVIVEKLGSPEETYENFTACLPANECRYAVFDFDFTTNENCQKSKIFFIAWAPDTSKVREKMVYASSKDRFKRELDGIQVELQATDPSEMSFDIIKARAI* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2237 130 Pfam Cofilin/tropomyosin-type actin-binding protein 7 127 IPR002108 GO:0003779
Vra8g2237 130 CDD ADF_cofilin_like 1 129 IPR017904 GO:0015629|GO:0030042
Vra8g2237 130 Gene3D Severin 1 130 IPR029006 -
Vra8g2237 130 PANTHER COFILIN/ACTIN-DEPOLYMERIZING FACTOR-LIKE PROTEIN 1 130 - -
Vra8g2237 130 SMART adf_2 5 130 IPR002108 GO:0003779
Vra8g2237 130 SUPERFAMILY Actin depolymerizing proteins 3 128 - -
Vra8g2237 130 PANTHER COFILIN-RELATED 1 130 IPR017904 GO:0015629|GO:0030042
Vra8g2237 130 ProSiteProfiles ADF-H domain profile. 1 130 IPR002108 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2237 Vra-Chr8 40687636 40688680 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2237 - K05765 gmx:121174301 252.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2237 8 40687636 40688680 Vra11g0289 11 2047705 2049475 ECH
Vra8g2237 8 40687636 40688680 Vra8g2237 8 40687636 40688680 ECH