Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0289 ATGGCAAATGCAGCGTCCGGAATGGCCGTGCATGATGACTGCAAATTGAAGTTTCAGGAGCTTAAAGCAAAGCGGATCTACCGATACATTACGTTCAAAATTGAGGCACAATCAGTTGTGGTTGACAAAATAGGGGGATCGACAGAAAAATACGAGGATTTTCAGGCCAGTTTGCCAGCTGATGAGTGTCGCTATGCCGTCTATGATTTTGATTTCACAACTGATGAGAATTGCCAGAAAAGCAAGATCTTCTTCGTTGCATGGTCACCAGACACTTCAAAGGTGAGGATGAAGATGGTGTATGCAAGTTCCAAGGATAGATTCAAGAGGGAACTAGACGGCATTCAAGTCGAACTGCAAGCAACTGATCCAAGTGAGATGAGCTTGGACATTGTAAAAGCGCGAGCCCTCTAA 414 0.4469 MANAASGMAVHDDCKLKFQELKAKRIYRYITFKIEAQSVVVDKIGGSTEKYEDFQASLPADECRYAVYDFDFTTDENCQKSKIFFVAWSPDTSKVRMKMVYASSKDRFKRELDGIQVELQATDPSEMSLDIVKARAL* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0289 137 Gene3D Severin 1 136 IPR029006 -
Vra11g0289 137 PANTHER COFILIN-RELATED 2 137 IPR017904 GO:0015629|GO:0030042
Vra11g0289 137 SUPERFAMILY Actin depolymerizing proteins 3 135 - -
Vra11g0289 137 SMART adf_2 12 137 IPR002108 GO:0003779
Vra11g0289 137 Pfam Cofilin/tropomyosin-type actin-binding protein 14 134 IPR002108 GO:0003779
Vra11g0289 137 ProSiteProfiles ADF-H domain profile. 5 137 IPR002108 GO:0003779
Vra11g0289 137 PANTHER COFILIN/ACTIN-DEPOLYMERIZING FACTOR-LIKE PROTEIN 2 137 - -
Vra11g0289 137 CDD ADF_cofilin_like 6 136 IPR017904 GO:0015629|GO:0030042
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0289 Vra-Chr11 2047705 2049475 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0289 K05765 - gmx:100785437 257.684
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2237 8 40687636 40688680 Vra11g0289 11 2047705 2049475 ECH
Vra11g0289 11 2047705 2049475 Vra11g0289 11 2047705 2049475 ECH
Vra11g0289 11 2047705 2049475 Vra7g3494 7 54264529 54268890 PCT